Package: systemPipeRdata
Title: systemPipeRdata: Workflow templates and sample data
Version: 2.14.2
Date: 2026-01-08
Author: Thomas Girke
Maintainer: Thomas Girke <thomas.girke@ucr.edu>
biocViews: Genetics, Infrastructure, DataImport, Sequencing, RNASeq,
        ChIPSeq, MethylSeq, SNP, GeneExpression, Coverage,
        GeneSetEnrichment, Alignment, QualityControl, ImmunoOncology,
        RiboSeq, WorkflowStep
Description: systemPipeRdata complements the systemPipeR workflow management
        system (WMS) by offering a collection of pre-designed data analysis workflow
        templates. These templates are easily accessible and can be readily loaded onto
        a user's system with a single command. Once loaded, the WMS can immediately
        utilize these templates for efficient end-to-end analysis, serving a wide range 
        of data analysis needs. 
Depends: R (>= 3.6.0)
Imports: methods, Biostrings, BiocGenerics, jsonlite, remotes
Suggests: GenomicFeatures, txdbmaker, GenomicRanges, IRanges,
        Rsamtools, ShortRead, rtracklayer, RUnit, BiocStyle, knitr,
        rmarkdown, systemPipeR, kableExtra, magrittr, dplyr
VignetteBuilder: knitr
License: Artistic-2.0
NeedsCompilation: no
URL: https://github.com/tgirke/systemPipeRdata
git_url: https://git.bioconductor.org/packages/systemPipeRdata
git_branch: RELEASE_3_22
git_last_commit: 5b83427
git_last_commit_date: 2026-01-08
Repository: Bioconductor 3.22
Date/Publication: 2026-01-13
Packaged: 2026-01-13 16:48:27 UTC; biocbuild
