Package: FieldEffectCrc
Version: 1.19.0
Date: 2020-0920
Title: Tumor, tumor-adjacent normal, and healthy colorectal
        transcriptomes as SummarizedExperiment objects
Authors@R: c(
  person("Christopher", "Dampier", email="chd5n@virginia.edu", role=c("aut", "cre"), comment=c(ORCID="0000-0003-3099-6462")),
  person("Bioconductor", "Package Maintainer", email="maintainer@bioconductor.org", role=c("ctb"))
  )
Depends: utils
Suggests: knitr, rmarkdown, BiocGenerics, sva, BiocManager
Imports: BiocStyle, RUnit, SummarizedExperiment, ExperimentHub (>=
        0.99.6), AnnotationHub, DESeq2
Description: Processed RNA-seq data for 1,139 human primary colorectal tissue
  samples across three phenotypes, including tumor, normal adjacent-to-tumor,
  and healthy, available as Synapse ID syn22237139 on synapse.org. Data have
  been parsed into SummarizedExperiment objects available via ExperimentHub to
  facilitate reproducibility and extension of results from Dampier et al.
  (PMCID: PMC7386360, PMID: 32764205).
License: Artistic-2.0
URL:
        http://bioconductor.org/packages/release/bioc/html/FieldEffectCrc.html
biocViews: ExperimentData, ReproducibleResearch, Tissue,
        Homo_sapiens_Data, ColonCancerData, RNASeqData, ExpressionData,
        ExperimentHub, SequencingData
VignetteBuilder: knitr
NeedsCompilation: no
BugReports: https://github.com/Bioconductor/FieldEffectCrc/
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/FieldEffectCrc
git_branch: devel
git_last_commit: 1d5c1c7
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-04-17
Packaged: 2025-04-17 15:20:12 UTC; biocbuild
Author: Christopher Dampier [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3099-6462>),
  Bioconductor Package Maintainer [ctb]
Maintainer: Christopher Dampier <chd5n@virginia.edu>
