Package: DeSousa2013
Type: Package
Title: Poor prognosis colon cancer is defined by a molecularly distinct
        subtype and precursor lesion
Version: 1.46.0
Date: 2013-04-10
Author: Xin Wang <Xin.Wang@cruk.cam.ac.uk>
Maintainer: Xin Wang <Xin.Wang@cruk.cam.ac.uk>
Depends: R (>= 2.15),
Imports: affy, frma, frmaTools, hgu133plus2.db, hgu133plus2frmavecs,
        sva, rgl, ConsensusClusterPlus, cluster, siggenes, ROCR, pamr,
        survival, gplots, AnnotationDbi, Biobase
Description: This package reproduces the main pipeline to analyze the 
	AMC-AJCCII-90 microarray data set in De Sousa et al. accepted by Nature 
	Medicine in 2013. 
License: Artistic-2.0
biocViews: CancerData, ColonCancerData, MicroarrayData
Collate: preprocessing.R consensusClustering.R featureSelection.R
        classification.R prognosis.R figures.R pipeline.R
LazyLoad: yes
git_url: https://git.bioconductor.org/packages/DeSousa2013
git_branch: RELEASE_3_22
git_last_commit: 9a00f0d
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.22
Date/Publication: 2025-11-04
NeedsCompilation: no
Packaged: 2025-11-04 16:17:08 UTC; biocbuild
