5cbc2cb2ff3f2cbf2d1a7cc4bd5791a3 *DESCRIPTION
85b0a4ed2de166434b448da3595a2d72 *NAMESPACE
ff2c071759a5d1b0d3f74277bd3d60e5 *R/SPIN.r
cbcc6c5a5941add367c83b7fd15c8df3 *R/Swanderlust.R
aae1ef292eac52c18af5d895f4bf40df *R/autoSPIN.r
e7a9f85c14766c26b2696fd984076664 *R/monocle.R
f69c6c2e92053912b590475266927908 *R/uSORT_GUI.R
ace19277b720605bfb52bf887837934a *R/uSORT_GeneSelection.R
4bc5b1e517b93c92d3387d4dae3e898b *R/uSORT_main.R
7bc1de7a2963562af55481cf472fca08 *R/uSORT_postProcess.R
ed9ee15eb51484cf773e9181635d006b *R/uSort_preProcess.R
4fc01d7ae466f42e32c4fefc49411211 *R/uSort_sorting_wrapper.R
0df8a6936177804fc33af4fce53dedf8 *build/vignette.rds
04d37509201a6dc6357fc644e826e381 *inst/NEWS.Rd
e9cbf8691e8743b3ecbe6f8c8bc39226 *inst/doc/uSORT_quick_start.R
8bdf1d5f7d88838ba3498881bfb0927e *inst/doc/uSORT_quick_start.Rmd
bb6fb60cb0816b4ef2183f374c2c58d7 *inst/doc/uSORT_quick_start.html
15434efdc398547f4134f1191813aedf *inst/extdata/TPM_test.txt
a7c7966a67350e6ad8c424e165dd1422 *inst/unitTests/test_Rwanderlust.R
01a31bd1baee2de4ca5b1d075c01ecc4 *man/EXP_to_CellDataSet.Rd
4a78e3d367ad5338c818345b6e8d21b5 *man/Rwanderlust.Rd
9e3ea6946d1568df6e45fcfcd362c8cb *man/SPIN.Rd
81dd8396e6388d21c722e0b042b13de9 *man/STS_sorting.Rd
f743bd3fa44fb7eacddbc17b80653fde *man/STS_sorting_wrapper.Rd
215665af4f8f251d291c9c566d21b27f *man/STS_sortingcost.Rd
d092585279297cb66117a69f3cc017b8 *man/autoSPIN.Rd
b847ef0dd3b62d9e675511e73bae8b8c *man/clusterGenes1.Rd
1b8aef4c651a73c482252595bfcb9789 *man/compareModels1.Rd
2ea4f43423503c48853ac3d2f47e6b2e *man/diff_test_helper1.Rd
bda3f2a88d47a6c2bec4422a994ef4b6 *man/differentialGeneTest1.Rd
2275cdc5166bceb1f1fe3e3594ca1a61 *man/distance.function.Rd
15de3ad35f0471b1070b3fa28e90bf2c *man/driving_force_gene_selection.Rd
1129ced41b2cdbaa27b3eea1ba65f718 *man/elbow_detection.Rd
74119fe9908148e43482f32f047559ea *man/fluidigmSC_analyzeGeneDetection.Rd
596759f9d1fe43d9e1febb4c55a1b951 *man/fluidigmSC_identifyExpOutliers.Rd
c3d8838481ebee54c1d77abe0d2bb4a4 *man/fluidigmSC_isElementIgnoreCase.Rd
3525f2e8af9a407dff27188aefb47cd0 *man/fluidigmSC_readLinearExp.Rd
a11bc922aa1943720b0fc4178905f296 *man/fluidigmSC_removeGenesByLinearExpForAllType.Rd
690a8e338aa8412f07f9e3ebcbb8c6f6 *man/fluidigmSC_removeGenesByLinearExpForAllType_log2.Rd
9739ad3e2dd61c8dfbcf70bd746e9bec *man/monocle_wrapper.Rd
36d1db75ab32128404f80ddd30d1ab87 *man/neighborhood_sorting.Rd
6df5a37f06d1a992fe0a6cdc3c510b23 *man/neighborhood_sorting_wrapper.Rd
6de227b9ea1790d1181d55d43d8d827f *man/neighborhood_sortingcost.Rd
58e138ed616856b246f4957e06185c8d *man/pca_gene_selection.Rd
d6475dc660be1dbce96cff875651dd75 *man/sWanderlust.Rd
537bc248cf39497672a67b98368e1323 *man/scattering_quantification_per_gene.Rd
580026ba91085528905f02bb354f51a5 *man/sorting_method_parameter_GUI.Rd
6c8aa0089837ffb94ced930725616ce6 *man/summed_local_variance.Rd
59300426fd3c77b05718a7b8964a5b47 *man/summed_local_variance_cyclical.Rd
b58fba5be6b9f08f25d5b93264004eaa *man/summed_local_variance_linear.Rd
ea88050f267b0d929c3c941a04e45211 *man/trajectory_landmarks.Rd
f29314f97c6ef9f25e8e6c63b3381bf9 *man/uSORT.Rd
18dc8a57ccac25ddf36488e46be63b54 *man/uSORT_GUI.Rd
92ce9920569240fc33354b3494d0144e *man/uSORT_parameters_GUI.Rd
7ac580f14c33ff5137dfaa776938f637 *man/uSORT_preProcess.Rd
8b8f6cd4bf20513d275de9acb8dcdcad *man/uSORT_sorting_wrapper.Rd
db666865d82545b2db5339e76fc9ae5d *man/uSORT_write_results.Rd
b864fbe81ba7b22be523c6ed0dc84628 *man/variability_per_gene.Rd
f1b3754d08644d2c220e3eaf2384f4c9 *man/wanderlust_wrapper.Rd
9b4c0b78c4e7f64aae55b9ad6452f84c *tests/runTests.R
edfa1c6ecba1d583b04f69699811d522 *vignettes/driver_gene_profile.png
cf57ec24d42741b2463ad403b2673d39 *vignettes/preliminary_sort_distance.png
8d710aa38d278d8dc7ded61d31952eea *vignettes/preliminary_sorting_cell_type.png
9351a1a9c0357abe7f14cd61f4fcdc74 *vignettes/refined_sort_distance.png
c5c704263ee653df6c88a8022b436634 *vignettes/refined_sorting_cell_type.png
d2f73ef492399387327f03033fbd549b *vignettes/uSORT_GUI.png
57f02731da2f13a7a97b58b11b4bd59d *vignettes/uSORT_para_GUI.png
8bdf1d5f7d88838ba3498881bfb0927e *vignettes/uSORT_quick_start.Rmd
fb69c9c72849da0e99b1ddc96a6ce440 *vignettes/uSORT_workflow.png
