6e39fae78b18d9a7ad23d2d67a6ae275 *DESCRIPTION
391c50b5dfe2e6555816d5bc54e4a9c8 *NAMESPACE
5c58f77f5e6f0d47d723ee8af74f35f2 *R/KRAScounts.R
5f00cfb95fe4fdf72c895c38437e273c *R/KRASdata.R
158af9b17adfe1bc98745369b07284b4 *R/clusterCentres.R
0f9752f309b78b273b0e2177a416c960 *R/clusterStats.R
40aca09796005d2e04d2b45d68ca4c0b *R/ddpcrPlate.R
9afeb7f6d6c3faf316f5b8ca3b91e914 *R/ddpcrWell.R
f13b7225d3cd86b68b6de1c6d6c7cf0a *R/dropletPlot.R
4c75d545e792c5239c4c0c26897911f9 *R/exportTable.R
8f00d244657aa79026c039bbeb512b40 *R/facetPlot.R
bc4e4214fa59fb5c2161a45757132c59 *R/flatPlot.R
920864d17501f43eee782118f2ea94b4 *R/ggplot.R
c15187e2d5ba883e1d87a63d4207a911 *R/global.R
228fd2388d4329e2075b78eb94d7556c *R/gridClassify.R
aa42d18e3290216704e30702b9ed5fbd *R/heatPlot.R
657fd36b3d069366aa8dca09792f2fa7 *R/isTwoDimDataFrame.R
f1100aadf958c4855d8c91bce05896ce *R/kmeansClassify.R
5c7a2ceab41fe3e058823a66a560cec3 *R/knnClassify.R
af385f1a053793e2705325c9ac02885a *R/mahRain.R
79a26ae659f3063feefe5194275d0a57 *R/normalise.R
e7c8f22aaaec026703e20da15d060243 *R/numDroplets.R
82462189dc73dac2dfc39d4b1196e635 *R/parseCounts.R
4a5ad615c85fb7719bdb8f8d5e084e94 *R/plateSummary.R
07d75e7e8d434e48547e298cf3efc4ba *R/readCSVDataFrame.R
6c0f15cc85f7523dc9694c2edc5585b9 *R/relabelClasses.R
c40ef28d9106a6c5ab711ed4aa90e237 *R/removeDropletClasses.R
9b03c46b43785ee58809bd0f4e467586 *R/sdRain.R
b2410a9e285807822e231dfc0912b1d6 *R/shinyVisApp.R
aa5654a9e1df98a80f4f7f2fabc7063c *R/shinyVisGlobal.R
a6ff55f23d61fb7b8745d37367badb18 *R/shinyVisServer.R
860083959c321d74a69b90171a788355 *R/shinyVisUI.R
329397bfa7df668354cba1d28aefbdf8 *R/summaries.R
8bfb740401b03a1e93a968eafc18028f *R/themes.R
0eb6cd2d28f55f46bc37e3f817f40349 *R/twoddpcr.R
f12672aea55a522e231a1eaa0547e96a *R/wellNameSort.R
2824528611cf3b11364c50097fd51495 *README.md
634750caa11760c2e070aac0cfaf3686 *build/vignette.rds
5a4dadf6e778e5dacd5bfb25e9fed1af *data/KRAScounts.rda
65ea7136f2b45ca001f2fe094f8d1071 *data/KRAScountsQS.rda
bb5684e6ce0fc719af0c276fde810477 *data/KRAScountsWellCol.rda
e9418ee7dccd573e8b8d861ce3f52886 *data/KRASdata.rda
fb6f9df5e3a85901730448101c4d75b3 *inst/CITATION
71fd364f8ffcbbed750963e6ede7ef9d *inst/NEWS
4f27f3d318598e0d13106900ab0559e0 *inst/doc/twoddpcr.R
8359cc3578aabfc9efa8d7f2693fa4f3 *inst/doc/twoddpcr.Rmd
fc36bc1ce97c90b865b270442ec18846 *inst/doc/twoddpcr.html
13d693f230fa5b6744f36c3deccc2d98 *inst/extdata/amplitudes/sample_B03_Amplitude.csv
7f257382549618ae42f1f4beb4a099cb *inst/extdata/more-amplitudes/sample_A04_Amplitude.csv
519c462a951d0d90983f6fc11667c0c5 *inst/extdata/more-amplitudes/sample_A05_Amplitude.csv
de94d7dc99e7de6277940972a48345d2 *inst/extdata/more-amplitudes/sample_B06_Amplitude.csv
75ae24a109e251e0e70437405906c919 *inst/rmd/report-html.Rmd
7f257382549618ae42f1f4beb4a099cb *inst/testdata/sample_A04_Amplitude.csv
519c462a951d0d90983f6fc11667c0c5 *inst/testdata/sample_A05_Amplitude.csv
13d693f230fa5b6744f36c3deccc2d98 *inst/testdata/sample_B03_Amplitude.csv
de94d7dc99e7de6277940972a48345d2 *inst/testdata/sample_B06_Amplitude.csv
89fa37bfa320ce375f2bb5d27d77fd59 *man/KRAScounts.Rd
cec0e0f87e5fed06e56853e7ff7af451 *man/KRASdata.Rd
bc7be0b544e4a041f8f2d03f6a54b711 *man/amplitudes.Rd
96a3969ce1a83d60bd6d112ee293a224 *man/basicsSummary.Rd
2c8d9bac41076946387a6f5a98b98177 *man/castSummary.Rd
1b902b69e0eb6d416347451b8d5837d2 *man/classCov.Rd
31071f62edc0f4ae8c7cf68099c12fd8 *man/classMeans.Rd
abe16ed0a8a4999a2917295fb22fcf39 *man/classStats.Rd
ab5f8389c7c07eb36e8190a824cb5fcc *man/clusterCentres.Rd
2bfde673ece6e35d0f9fbc8c61bb3118 *man/copiesSummary.Rd
ce355dca8b017df32f86e18ea63e976b *man/ddpcr.Rd
7e4251cfe1ecc5d3c893c46c455a1e60 *man/ddpcrPlate-class.Rd
b3b80705ffdc6ce0c50ed609a2d891ba *man/ddpcrWell-class.Rd
6ddd437903ac9a3d70d57a16f7451d1e *man/ddpcrWell-methods.Rd
a0aa0e6e2040f596587069d4e72b33d6 *man/dot-classifyDfOnChannel.Rd
477258718bff81ea67678dfdb046cf16 *man/dot-classifyOnChannel.Rd
3b31ceb420d90f23b26f4aad2e9bea2b *man/dot-classwiseMahalanobisRain.Rd
5617375c44594f1567dec6205cf1ac9e *man/dot-cov.Rd
c63bbb74d3f0e03780676672fd1677b2 *man/dot-dependentCols.Rd
dbd9ea49819fde949f128adcfb2f570e *man/dot-essentialDependentCols.Rd
8ae686c02f0040502444d4558342dae8 *man/dot-extractWellNames.Rd
b64edabb6e0dede2bd3bd45748fc6a25 *man/dot-getAllSummary.Rd
80e23fba7bbb71528c9864183c6b72f1 *man/dot-getChannelCentres.Rd
322d0efa4940e97c1cd5e6dc5bf28b82 *man/dot-getClassificationData.Rd
ecddfc4d15e2bbd4154491445df0b56d *man/dot-getMutCopies.Rd
cfe2392c006df8d55776570e5e95a021 *man/dot-getWellNames.Rd
d7065c496a906a6dd5ba587f7486e78e *man/dot-getWtCopies.Rd
7b01bfb564c676757cbdfff0380f155f *man/dot-isTwoDimDataFrame.Rd
4ab3ef59d77e3a7fd7ef196de5b70f22 *man/dot-isWideForm.Rd
b30040316625bf4078479867085a0699 *man/dot-mahDist.Rd
44d655c61d2b00e220b2ab858569b180 *man/dot-matrixInverse.Rd
930fbf4ff235e53fbe32e8e6e2a8a964 *man/dot-numberOfWells.Rd
861c8d8bffae872261ccd3eb3d7d512e *man/dot-renormaliseByChannel.Rd
85bdade874c104609e6e38b778a97d7f *man/dot-renormaliseWell.Rd
e082ffaeb04f9a1c5d275e2e5555e339 *man/dot-roundIt.Rd
320d261546b232fd9fab71040d487e2b *man/dot-slice.Rd
2b981fe0ebedacb9954748fc84d48628 *man/dot-totalCopies.Rd
7e7bbc4fab265f71865732483c72412b *man/drawBlank.Rd
011d2c7bda8a34899b1506d435c95446 *man/dropletPlot.Rd
3d3e65209bcf6c40fe6cfedfce0d9891 *man/elementType-SimpleList-method.Rd
b4ab212c379840acaa07c7a1408f2ec7 *man/exportTable.Rd
a30bcc4cd18b71d853907efd74d3206b *man/extractPlateName.Rd
d6307f77cc0d9b5d390967b0b29637d5 *man/extractWellNames.Rd
622f9f80d15f36c2355e7a41fa76464b *man/facetPlot.Rd
052f4bf898273caf6b000b31016f4b56 *man/flatPlot.Rd
4b0719042b332243772d42f23cfe761b *man/fullCopiesSummary.Rd
7f0400d1a688ccd6886b1bf576e9a157 *man/fullCountsSummary.Rd
910732e8d19ff423a33e00cf7dc83a37 *man/getCutOff.Rd
2c2c9c95f170b10016a42794c6585862 *man/ggplot.well.Rd
7fbac405255dca26ed9056856fb30713 *man/gridClassify.Rd
4e35a51d2dfa0ad153cca6f63f02f8e8 *man/heatPlot.Rd
6f3164a160bdec476dba2591bd5eeb00 *man/kmeansClassify.Rd
2277d5996f108e6788d3d55b97be476a *man/knnClassify.Rd
c0fb25f019402bbdbc422f45af467a63 *man/mahalanobisRain.Rd
0003ec392987b099e464d266361a7537 *man/mutantCopiesSummary.Rd
b29c431f43598edfb749dbfde4376fe6 *man/numDroplets.Rd
ea878df9c40973af22d7edbfb750f3fb *man/numericInputRow.Rd
e37fe8cd216e36686eefe76897839a84 *man/parseClusterCounts.Rd
9dbbf1df9fcb3ab84f6c53f3ce2ebcce *man/plateClassification.Rd
13260e0a55efb7767e39cc935b8e8ed3 *man/plateClassificationMethod.Rd
3cb689b47435c8c346c7f1f821f2e757 *man/plateSummary.Rd
e7d71eb555f4bd144307101c8d681b5d *man/positiveCounts.Rd
43811ecccbd3b2b869b28522dfe0e96a *man/readCSVDataFrame.Rd
4a2c6f4613dddc1a4b17641ebc261b0a *man/relabelClasses.Rd
d9f7e7e7ff5f0ac61f9ac5086ba39c8a *man/removeDropletClasses.Rd
8083e7b3c62ed03c7996df799f3b3f8e *man/renormalisePlate.Rd
7d7d0b240d12f99abd2189dbee10d524 *man/sdRain.Rd
4bae5290c24d84ea379281c6c374479a *man/setChannelNames.Rd
bac860a5ec96efebc2235d8e69d98cf1 *man/setDropletVolume.Rd
94bc6496170075ce4e5ac56cbdc40db2 *man/shinyVis.Rd
549aca73ceaa6f8a862b2790c62d0050 *man/shinyVisApp.Rd
4895f921498bb1c1b3acc24b29d86b63 *man/shinyVisServer.Rd
2184b7d30492756185453ec186db64d5 *man/shinyVisUI.Rd
a81728ae3aba2d2e5c18027ac2dad939 *man/sortDataFrame.Rd
32873de5f1d4e6a1f38177ffd29a8e66 *man/sortWells.Rd
e5cb2a0c6ab9659dc1ddfc8e6afb2315 *man/textInputRow.Rd
919e5ebcb388d2c0b68e4972284d3aaa *man/thresholdClassify.Rd
e165bc9e86818eaac094718cb48a34e4 *man/twoddpcr-package.Rd
0b59efd5e89c06367912919613e1f90a *man/wellClassification.Rd
d811c73b291438a9b3f83c83fed97e71 *man/wellClassificationMethod.Rd
8023cd766e13d57c5b75e67afcb80f59 *man/whiteTheme.Rd
124c163c8c7eab8ad104e53c07d822a3 *man/wildTypeCopiesSummary.Rd
e5a1371084ab8741388f763888c8d40a *tests/testthat.R
15120f249839ceb87cc2eb53dc222fa0 *tests/testthat/testClasses.R
a7d3a989a8239693faede52814d83645 *tests/testthat/testClassification.R
cc707c3bfdd5bdf245ed7e0c5635948f *tests/testthat/testClusterStats.R
c7efd5548a5a6f49320e182f0870f433 *tests/testthat/testDroplets.R
c9f0a9fe3d64b16b98e9000228450ea9 *tests/testthat/testFacet.R
0500b1e7e46e06f546ec9b2494ff5941 *tests/testthat/testGrid.R
9530f6a4372e04c8ce88c3b983fb4219 *tests/testthat/testKmeans.R
f66e0e414b99a6c7cebc62b90470600c *tests/testthat/testKnn.R
a93218a6c27c08d36308326c1cf35d09 *tests/testthat/testMahRain.R
6348d582553adea2155bc4c118f82410 *tests/testthat/testRemoveDropletClasses.R
9d690e510c04091cbf11aacf2dcb3560 *tests/testthat/testSdRain.R
0868c7cce130226f6444fe2c98875a6d *tests/testthat/testSummary.R
8359cc3578aabfc9efa8d7f2693fa4f3 *vignettes/twoddpcr.Rmd
