1cddc7837d38763d01331929d16f7820 *DESCRIPTION
14b731a7c25f34d504ef2d30d9dcee28 *NAMESPACE
0297052f5c1d0c34334e9d16b1d1ab2a *NEWS.md
d7b39f332edadcca4df9e3bbbc63cba7 *R/ASpli-helper.R
b901d871859566d285594dea43ae9c54 *R/Accessors.R
4b12539b4b2ed22ae51071c9b6c7ee44 *R/BamtoAspliCounts.R
ec26a9dbaf1f032177359f5eb18bea05 *R/binGenome.R
965f34a423734fa0076867945e522c3f *R/calculateOffsets.R
78dd3d0f4249306ac541c9f986f8d618 *R/convertASpli.R
156f19f8510e867131d067c310fb9243 *R/data.R
41c225862e3c68401d82c64721b2d2a2 *R/saseR-package.R
0a29c7b7bea64841178b345b2e708d78 *R/saseRfindEncodingDim.R
298173593a251daa80d8a77833981057 *R/saseRfit.R
fc82db4c97b33de96ce077e2acea869d *README.md
1bf18d9c216b8d95033f0bd2fe2906b2 *build/partial.rdb
807cfbc47fedf48ba744f439b723ab2f *build/vignette.rds
792fe47df5da2e90e90e6fdba6670615 *data/saseRExample.rda
02dea37d7d8351d710ca2b3545a065e1 *inst/doc/saseR-vignette.R
da85221713980044870b3ee118102684 *inst/doc/saseR-vignette.Rmd
482396b7f2c5f73428ae281aa7486a25 *inst/doc/saseR-vignette.html
0728be11567fe4483bccf6310a175310 *inst/extdata/A_C.bam
78657264c31713ef1a04ccf98bd0d76a *inst/extdata/A_C.bam.bai
01050255ece67cfbf3305efb09ba312e *inst/extdata/A_C_0.bam
dc24486cf04fbe769e806226ec3461c4 *inst/extdata/A_C_0.bam.bai
976c49e3f28840c19214e249509787fb *inst/extdata/A_C_1.bam
1737225874621b918f67faacc4ef59c0 *inst/extdata/A_C_1.bam.bai
40e5b30bb5bfee10247ce72262543518 *inst/extdata/A_C_2.bam
abf9b23ddd6d0ca9c85b9aaf85cbecc6 *inst/extdata/A_C_2.bam.bai
05bff3987c49458abcfc130f8c026df5 *inst/extdata/A_D.bam
4377be925cb032f72049092d5ee1453e *inst/extdata/A_D.bam.bai
6df717cb64a4640e02959ae7163f8115 *inst/extdata/A_D_0.bam
c548e13dab842845e9c46bf7cecacc16 *inst/extdata/A_D_0.bam.bai
e0a467934f0fff4676a4aa275939295e *inst/extdata/A_D_1.bam
9ac10b276a82b3ff4349e93048d927d4 *inst/extdata/A_D_1.bam.bai
625254e187de8e229059007af8651c80 *inst/extdata/A_D_2.bam
e0b392623b691fd2a896833e7fcb76e4 *inst/extdata/A_D_2.bam.bai
44b598fbf17e3245b4c20ec7549a389c *inst/extdata/B_C.bam
aac27065577f1aef796a27c982a02115 *inst/extdata/B_C.bam.bai
7a33871d5041db6bb9677c74e04a3cc6 *inst/extdata/B_C_0.bam
bd6b4b2c6427551a09b0881c36342f04 *inst/extdata/B_C_0.bam.bai
52e4181587de71a4e65fa75fe1ac7e6d *inst/extdata/B_C_1.bam
f674cce2ce514331a2aed28c4ee9cb2a *inst/extdata/B_C_1.bam.bai
98bc2947d22d28e8f994bff3a646dc80 *inst/extdata/B_C_2.bam
2eb7246bbf14c803879bc208172a52ab *inst/extdata/B_C_2.bam.bai
0b00419964f37e1e109cb5bc98608a36 *inst/extdata/B_D.bam
da28a074b3de156e472cfa67410dea00 *inst/extdata/B_D.bam.bai
b1694eebfa24f2e72782d08152e05016 *inst/extdata/B_D_0.bam
2daa58549bff2a404791393390d7ee96 *inst/extdata/B_D_0.bam.bai
74812f1bcdebbf9fdac8a3c242b7a88f *inst/extdata/B_D_1.bam
02a08654aaa121566a1b82e849455d13 *inst/extdata/B_D_1.bam.bai
234b9394f5fb97497119280251218b79 *inst/extdata/B_D_2.bam
01819a132799c4cb1b69cdab3e996b6f *inst/extdata/B_D_2.bam.bai
b417f146aaaad2b5d073d68371d29080 *inst/extdata/genes.mini.gtf
772e368c75e453f4e51283a6d62f5909 *man/ASpliSE.Rd
6eac201b0e46a3711687570626a7b8b5 *man/BamtoAspliCounts.Rd
60b95dc25a9a9bedb5197cafc6131114 *man/SEbins.Rd
3400ca5a0fc2247a664346510d8e7604 *man/SEgenes.Rd
5044fab0576210cc8fd36a805280f63e *man/SEjunctions.Rd
3a707c3b3263d75d10a3361cf2948c51 *man/calculateOffsets.Rd
a4b4c5fa5ef70b8fa94eaad4875110c7 *man/convertASpli.Rd
3f5ae2ec4179cfeb5a40edceea1b92e1 *man/features.Rd
dc8e4e8698eeae2a3e74125d0fd2b5de *man/saseR-package.Rd
42d292ed5b4e4c837c891cb953c1db2e *man/saseRExample.Rd
92658e1caa7f4162afca9f9590206056 *man/saseRfindEncodingDim.Rd
9ff125eb1bf0cab80e6c3d99568e5d57 *man/saseRfit.Rd
da85221713980044870b3ee118102684 *vignettes/saseR-vignette.Rmd
4e9f6e57b7d5fb2f9804d91102672c6d *vignettes/saseR.bib
