63e950c6ff8d76fb03993bf5c0cfe9d0 *DESCRIPTION
cec4f21e922c5fe1bb5d9aaf1daa22df *NAMESPACE
6c5661c5254823a10874536ec0ba8829 *NEWS.md
ed80161fbde5b8386190f30de349db0c *R/AllClasses.R
1193ba5f7d96ea9bb1e492c138b896c3 *R/checkMatch.R
f7d1a61c4c9fcd5f15a9ebb4c8601433 *R/consensusProfile.R
0ae6c56d7ae783f603f7c1c1e0555046 *R/datasets.R
413b6b6c8d9a249645110e4fa326fd2a *R/designAssays.R
dc0580d166539fa087c03d4015defbde *R/designOligos.R
0049ea877085984e52e3d378e704ef09 *R/plotData.R
d84d24695bc0fadd16f0eef3f32e2479 *R/rprimer-package.R
cb76ac94667031ab7713aef38854e400 *R/runRprimerApp.R
912eaa9d101861acdcdd366595012927 *R/shiny-app.R
06c3db27c57145aff88422279d1b2423 *R/shiny-helpers.R
b884c2f5bb43425aea7b634441c9524c *R/shiny-module-assay.R
03e737538e108b65e60c82736d4ccbbb *R/shiny-module-assay_filter.R
6ba3e790faece7312ee1e55317772109 *R/shiny-module-consensus.R
5a2777babd33442954e3b45e88a13ea4 *R/shiny-module-data.R
80115c9dd0c644746bf34e32ebb28c17 *R/shiny-module-oligo.R
96e140aa84bbdde16747f2f16df875e3 *R/shiny-module-oligo_filter.R
2eee8af275abc15e8e90dedd77b3130d *R/shiny-module-welcome.R
7a3b1a61ff0a16bc034116f1c7340400 *R/sysdata.rda
f7f66b476d85fa1bbe8160ae663728c3 *R/tm.R
683276a32f24ca6a9bb4126a6462542e *README.md
1e8e869a326e5cc89275784d8dcb64da *build/stage23.rdb
38b9b01f491bf9d2d371cf698c54c248 *build/vignette.rds
a6eee4842f9c16267b70524432d2020a *data/exampleRprimerAlignment.RData
2f7c7a6406cd375876fb4077060c125f *data/exampleRprimerAssay.RData
0e7531d1126401ef85c942e93b8a93b8 *data/exampleRprimerMatchAssay.RData
4166d33e63c328dc091de7211945ddce *data/exampleRprimerMatchOligo.RData
57c564df4bb8d44340ff099a541e46f0 *data/exampleRprimerOligo.RData
d538b5a1c95320ec7304a62161b1fe18 *data/exampleRprimerProfile.RData
fc6018d853c2115e92e7d6ebc51d8171 *inst/CITATION
faf4d1851b103bbcfd93c1561e488dcf *inst/doc/getting-started-with-rprimer.R
da624b6220cc10a66b2d83835324c677 *inst/doc/getting-started-with-rprimer.Rmd
a9486026b23c45c263416fd00f4a4e5a *inst/doc/getting-started-with-rprimer.html
ec77da64431285eac96b7d7064aacb65 *inst/extdata/example_alignment.txt
455338edecd6e923d97f18508ca39025 *inst/script/accession_valid_sequences.txt
19bbcb4819d4539d9a0e4ae5e5c5eec4 *inst/script/documentation_example_alignment.txt
2f7ab4e951c90b75f7591a5fcab0a81d *inst/script/script_to_identify_valid_genomes.R
1da028e4fd6af23bb9845dd6067d5ca3 *inst/script/typing_results.txt
2bb19bc9909d45f6d6ef51c0f3d53a05 *man/Rprimer-classes.Rd
1470fdd07aefddbbf5d9250f7ec9f470 *man/checkMatch.Rd
98faa12edd0e4df4e0fd4d2bec3fa8db *man/consensusProfile.Rd
3834353a7cd17623bfde0c4fcdbcb53c *man/designAssays.Rd
38ee3cab87fc0874fd2f07922bcb432c *man/designOligos.Rd
dcc0712d96629a6659dd05f411d9ea2f *man/example-datasets.Rd
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bb6222374e7530b33597f97ef11d3711 *man/figures/README-unnamed-chunk-9-1.png
545d3ad5581ed179b4ce1cd17531ce1c *man/figures/rprimer.png
d1f791b680718a21df8771203b863729 *man/plotData.Rd
e77a73993d914ef2d754db47991e1fc0 *man/rprimer-package.Rd
49292a01af97ee32d730064b1712d63c *man/runRprimerApp.Rd
b4a2ac566b3b112a873ab92fe64c0c26 *tests/testthat.R
1278f8e694e5f7e03971e74a8ca5e0ec *tests/testthat/test-AllClasses.R
80e72d737f6d9747ef9088febd8dd232 *tests/testthat/test-checkMatch.R
4e44cce0d5d7f77d166a3cf05800d3c8 *tests/testthat/test-consensusProfile.R
dd0801f6fd64bdc5e7daa814470af2c1 *tests/testthat/test-designAssays.R
3e73c43076b1ad53be57ce55b1c3b064 *tests/testthat/test-designOligos.R
ad1a4e0397ee33a669974f69d143f5d2 *tests/testthat/test-plotData.R
270d8e7b60b9fddd988153e278f3827a *tests/testthat/test-tm.R
a2c9a6f84d0b37bb19e557243e6eecc2 *tests/testthat/test-workflow.R
c05e3509001b84f537b8a1b22dbf498b *vignettes/bibliography.bibtex
1974699c9dce59afa4afc31684bd53fa *vignettes/biomed-central.csl
da624b6220cc10a66b2d83835324c677 *vignettes/getting-started-with-rprimer.Rmd
