30d9f90d5a2dcb6849805f76f9f8182c *DESCRIPTION
f54e081ee71430cc4aea45f3b9f34ebc *LICENSE
23ea382cfd762cee71aa14ef57dd69af *NAMESPACE
de280a7b734959363c294e0e63716bc8 *NEWS.md
d86ec5ee9717fc818d610309d9feb0f2 *R/buttonifier.R
c98f65f33ef974deff57eb279b1e0de0 *R/color_mgmt.R
e7524d72bef4039036bb7342d7f3a70e *R/de2df.R
a9f668df3509f4175a01bd81ff03f101 *R/expression_summaries.R
08613ed4cf48ad118d14caa83d5afaae *R/gene_annotation.R
61515caec11b75ed00460f34655b07aa *R/gene_plot.R
966f07ee8dbd4615c39b145811fa2f6b *R/mosdef-data.R
0c1e3df8b47ae303781f20998f3ef4fa *R/mosdef-pkg.R
c44325f0f42b820a352f1ea317c4c70a *R/mosdef_check_inputs.R
995b81926b93c5c9986844719f41b481 *R/plot_de_summaries.R
3e493b117068662c978ff9d07f7d7027 *R/report_helpers.R
7b1f9e483a5944f84348fca51ef4afb4 *R/run_enrichment.R
db7ac6be5e59e049a8daa74f93ec934a *README.md
f0987ba51624caa7a8bbb4b5d70a85be *build/vignette.rds
84bc72e631cb616e79736ea320fd5446 *data/datalist
bc8761a3bc1e8e94b17a033d7692c6e4 *data/res_de_macrophage.RData
45d26f0d6550de53243bd159fbc04ba0 *data/res_enrich_macrophage_cluPro.RData
e689272d49d9d3d8bd09b3f719e9d9d0 *data/res_enrich_macrophage_goseq.RData
9b7658e2e253cd499d85232974007c0c *data/res_enrich_macrophage_topGO.RData
7cc1411f7751cb8af2d086f4dc7cffdd *inst/doc/mosdef_userguide.R
cf1f7e1189c8f4d12e3394b73269109e *inst/doc/mosdef_userguide.Rmd
7cd0fa065f6b5120add36fb84e1f3916 *inst/doc/mosdef_userguide.html
a77eff43acdb27a86638297090572dde *inst/scripts/create_mosdef_data.R
228d5d28ba005a2963a72bd7833a545f *longtests/testthat.R
291079d5a08c7e2374d0df8ceac7f39d *longtests/testthat/setuptests_mosdef.R
ff6939bdb71223af936252165a13bfdf *longtests/testthat/test-run_cluPro.R
4202cf65f4db77ecc8fd7552efd264b4 *longtests/testthat/test-run_goseq.R
755a3d70055d2cc26c486c353d1934b6 *longtests/testthat/test-run_topGO.R
4beee2fbba53efca623ac70d7c30e5a0 *man/buttonifier.Rd
9b2adf1f004dcbd00283fd4e2665ce8f *man/create_link_ENSEMBL.Rd
e873dbc9e82c6194bded1b47db063cc8 *man/create_link_GO.Rd
3fd2cccd0b7015636e2cb381c8e7c475 *man/create_link_GTEX.Rd
b62e0b5415890905c7aaf888282f197b *man/create_link_HPA.Rd
f6ac10a95b23ebffa084d59da06a8ade *man/create_link_NCBI.Rd
cd76e19ec8c4cae0e3c234f03baed36e *man/create_link_UniProt.Rd
821cfe1fd85a08917905f08e2c63164c *man/create_link_dbPTM.Rd
22580c8a003ac9f067b5b9c340260c7d *man/create_link_genecards.Rd
cdaa4acba622d18744c76bd76e8241f1 *man/create_link_pubmed.Rd
0d21a4644139d1a7a87c22fae6c14c9d *man/de_table_painter.Rd
124134fa5d440b56ad1ed94b4db90799 *man/de_volcano.Rd
07f85a88bb586c21bbcb128e00529d26 *man/deresult_to_df.Rd
ff4bb3cf95d22e1868f64d84c6742f01 *man/dot-info_enrichrun.Rd
d2df39b0e816fe6e93d784e438b8c175 *man/gene_plot.Rd
d61570864f3b62e3735d647b4c01d0a0 *man/geneinfo_to_html.Rd
d86cef47a0712a2e4ee7ec2951efea0c *man/get_annotation_orgdb.Rd
f1d4a41beda5e83f1dde6070cf94b8b0 *man/get_expr_values.Rd
95dc7ba7955ebd1ec78dd5329540bb46 *man/go_to_html.Rd
d9867523b1e1dd6aeea3a7bf2a0158bb *man/go_volcano.Rd
a93efccce5f0978e69435d2691ffb566 *man/map_to_color.Rd
74c4ddbbca780b32ac71c577f85d5a3e *man/mosdef-pkg.Rd
ab346cbcc58876b0bf19a92dcea2518f *man/mosdef_de_container_check.Rd
2c65dccd08b654d915cc8394ddc2b9df *man/mosdef_res_check.Rd
638ca17f4e43d0758a74b902cbffc140 *man/pair_corr.Rd
c416b3970d1be9757901c7e94d6aef3d *man/plot_ma.Rd
fd37a2c1e4ac669ada3f0fe56c5b4013 *man/res_enrich_macrophage_cluPro.Rd
c107cbda777f57829ed2d831db72d944 *man/res_enrich_macrophage_goseq.Rd
7410bcb61814d8b01a7f71eeef1ad745 *man/res_enrich_macrophage_topGO.Rd
e64fbbee945c396d7a14017775812d7a *man/res_macrophage_IFNg_vs_naive.Rd
c16859fc63a609f53ddfab7fcb49cae7 *man/run_cluPro.Rd
996cd3a20a18a5ebb167ba52867bc258 *man/run_goseq.Rd
3b8986b7489a438fc0e0b3fbe0105389 *man/run_topGO.Rd
a107567d7167a8b0ff113e999000a1d7 *man/styleColorBar_divergent.Rd
228d5d28ba005a2963a72bd7833a545f *tests/testthat.R
291079d5a08c7e2374d0df8ceac7f39d *tests/testthat/setuptests_mosdef.R
cd2e61d29c7c6b3ec1c6752472b04761 *tests/testthat/test-annotations.R
a532bd6e0be9cd186c4f80ab8c3f6ae2 *tests/testthat/test-buttonifier.R
ddd1a3eea6db5f31474c871c3e1703e8 *tests/testthat/test-check_inputs.R
b8b5ae1b74ec83b4d284083d3230acaf *tests/testthat/test-de_volcano.R
2156132c48b8d49bc0cf5b9c8c42e316 *tests/testthat/test-deseqresult2df.R
643996d47f3e8d1a85d9c510d2c6019d *tests/testthat/test-gene_plot.R
af63cf35cfa0e2ff87afb437fcab659f *tests/testthat/test-map2color.R
f91dedb9e471d51526f74be40406c3ae *tests/testthat/test-plot_ma.R
953d887c3bae396d1e78ac2082833da4 *tests/testthat/test-report_helpers.R
8d306946862b90fa52543ac2181697d5 *tests/testthat/test-summaries.R
0bc48fcdb62c5bd34aec098625bbae84 *vignettes/mosdef.bib
cf1f7e1189c8f4d12e3394b73269109e *vignettes/mosdef_userguide.Rmd
