fba1d7f6df9df6e208f12f711569edcc *DESCRIPTION
c923766318c273e441fbd4945a33a43b *LICENSE
399720e56f0f8666b0a46c2cff3aebc5 *NAMESPACE
e3652db9954504482392dd78e86be03d *NEWS.md
11a6e86a9afd888844895288cbd6a894 *R/RcppExports.R
818b61ee5ea7da863b438c9621238162 *R/celda_functions.R
06581099f4c362e97e168d011d913916 *R/decon.R
e8d0e813b8530afa4363fcad75028907 *R/decontPro.R
0e8a0de8b01fee50109e00ae326c499d *R/decontX-package.R
6a43c432825ccb1bb6b69ed6f227b61c *R/matrixSums.R
dce9ad8da03902da0f7a93c9d9fb03f6 *R/package_skeleton_test.R
211382d264e00af08347bb486cf7be2e *R/plot_decontPro.R
4b68acb2d2231f096a800aa41fecfb3f *R/plot_decontx.R
f672fa196d1bf6b00a3eda494eca3e95 *R/stan_helpers.R
bbbcd89ecf5f8ceb6377ea5fab161776 *R/stanmodels.R
41d27df41d802f7ff8df46907f684185 *README.md
0a7a55509e6c05dba55dba013d74567a *build/vignette.rds
7e297a31e37e77c201a2bacff2f979eb *configure
5fdedca26c8830d7bb06aa1c4a634204 *configure.win
9f8a8492a2d0d02dc31908f21d1effa1 *inst/doc/decontPro.R
bb75e6eda1313227d9936bf5df8da256 *inst/doc/decontPro.Rmd
c8c15df08de5556904174afeb67682b0 *inst/doc/decontPro.html
4be9bef41eecadacddb77ced5078054c *inst/doc/decontX.R
5ac7541fa01eabb341668aa82a135d9b *inst/doc/decontX.Rmd
2b95e67abd5fd97f8042d072e11bc964 *inst/doc/decontX.html
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
6c07d411c9e2227a4d9613be151aeb89 *inst/stan/include/license.stan
aeabeaac0e250744bf4230fecc4860c0 *inst/stan/shrinkage.stan
ee7c83cf506342af1269c10c171614fb *man/decontPro.Rd
c57942a454ea5ffbf2b31e01b88df32a *man/decontX-package.Rd
b30be1f80a05ef76be84871e1fa91a03 *man/decontX.Rd
4936d04c4293eb8fdb49efc99b3a72c6 *man/decontXcounts.Rd
2fbd7db58447c01a93e9f6d2b864ae2b *man/dot-call_stan_vb.Rd
91ed48ab44d0e5d5fbc3373741d6c242 *man/dot-process_stan_vb_out.Rd
d9fe0a7cea20195a79d4058c14a930e2 *man/examples/decontX.R
ed7b81b7e94e70d6debfab3457992bbf *man/fastNormProp.Rd
97565b92527723b2af52f041cc172987 *man/fastNormPropLog.Rd
52e22793e708d8f0c2a9f8a9153a2964 *man/fastNormPropSqrt.Rd
c67ebe8a14b6c609e21dd47977d95000 *man/nonzero.Rd
fe175e58f7077e73f65c7a20ab1d4db7 *man/plotBoxByCluster.Rd
88a120574dad36de8adbac7d3a407015 *man/plotDecontXContamination.Rd
99041d1de4bd2b82a754d53a2c672fe4 *man/plotDecontXMarkerExpression.Rd
176bcdd9a09797e6d264032570d92d4c *man/plotDecontXMarkerPercentage.Rd
d94ce172f7b2285b919a87662dac42b5 *man/plotDensity.Rd
f58b5c558387fe78d463de3e512378fe *man/retrieveFeatureIndex.Rd
b63dd72691358febaf76dfd82da8459a *man/simulateContamination.Rd
89c04f9be1e47180b379fb1dc8ad3139 *src/DecontX.cpp
564c40d0e86bb1e58d039ff240e97b9f *src/Makevars
457929755cc1db9abe969d16b0006005 *src/Makevars.win
5b7c042fd0b52b73fbac9d64227b19a5 *src/RcppExports.cpp
d15df6204d8fa03e52a2019c1bfe9e1b *src/matrixNorm.cpp
903077fff67c3b9658f0933ccae364f4 *src/matrixSums.c
ee29298e1a4275d6b0706b3feb2947e1 *src/matrixSumsSparse.cpp
34219bc7bab781b410d89d23ff924610 *src/stanExports_shrinkage.cc
47a623f82c0d3de253f07c209dd9f622 *src/stanExports_shrinkage.h
e2633d02a21ea06df9141e3a7dbfe460 *tests/testthat.R
06bc90d639b3f4ccd1a2e583d69ab3b7 *tests/testthat/test-decon.R
273c1a52939f890d56c89bc0603b4711 *tests/testthat/test-decontPro.R
55104587ed4533ce35c3884004e8a8ce *tests/testthat/test-matrixSums.R
bb75e6eda1313227d9936bf5df8da256 *vignettes/decontPro.Rmd
5ac7541fa01eabb341668aa82a135d9b *vignettes/decontX.Rmd
