2b5ca3022760cd7bbf3c239aa10f6bfb *DESCRIPTION
dd432a01f05484712cb5980dc1b16065 *NAMESPACE
14c483004f9ec743ad4445511de7e69b *R/Class_methods.R
a1808e9c7829edd6c17f9e310bf90bef *R/PEI.R
5b94e21f2766ea246a8d153c32cb64e7 *R/clEnrich.R
778729367060e9aab582bfc56fcbcb74 *R/clEnrich_one.R
088a1dc34e51f78da34a4f808c504f5b *R/coExp.R
fd0ce857d7f07492742cb47ccdff85ba *R/cogena.R
b3bc415bad33fd0041bd81fe9151c561 *R/cogena_class.R
8df606afaf19a0fb96d1156c494180a0 *R/corInCluster.R
419a43da78c6f1a04319b8a6c6f24ca4 *R/dist_class.R
90e762109c7c3555bbf0045c210af8e5 *R/enrichment.R
a9c4cd3907a639b246f1610b8ab02ec6 *R/gene2set.R
f58e1783e8bf5b435e03b77232684468 *R/geneExpInCluster.R
d39985c9894bee86c929957cb3dfebd3 *R/geneInCluster.R
ce491a24f179a260e291a53772e6a956 *R/genecl_class.R
fca1c96f60c7c2294bbb33e9a12ae3e6 *R/gmt2list.R
2485c25810359f514619d5f1c4118654 *R/gmtlist2file.R
792f27cce18c73882ee7ca5c5ea0190b *R/heatmap.3.R
0f23f68529358f465e508a932b927f22 *R/heatmapCluster.R
ec70f2543b7508ac42fb495f8b004ed0 *R/heatmapCmap.R
d348ed8e5b1137752a6c7a0c9e490c19 *R/heatmapPEI.R
9010a53f2afdadd5cf4f8bc1c556bc11 *R/pClusters.R
07cb5ff547b884e16183de2d4860f8d3 *R/sota.R
912423f51a9188f1ea3ad9b0c79533b7 *R/upDownGene.R
5fca1f15b4343b26a7d31a9c44fbb063 *README.md
5d38d44951ca5b2707190d83d62133f5 *build/vignette.rds
5908875b14178b42493de5fa0fdaa769 *data/AllGeneSymbols.RData
5f683710750fe6581fda6a8bd0a5cfeb *data/Psoriasis.RData
9a502bdab7d9815999f205db52a801e5 *data/datalist
fbf15a61b9de2d677a05f7148c79adf7 *inst/NEWS.Rd
8b3a5763ae35ee8a20abf0ba3caccff7 *inst/doc/cogena-vignette_html.R
45c06374a6687b307eae2d031fbf857a *inst/doc/cogena-vignette_html.Rmd
b204e6f071cc26b28c11b3f9aef2748e *inst/doc/cogena-vignette_html.html
8b3a5763ae35ee8a20abf0ba3caccff7 *inst/doc/cogena-vignette_pdf.R
326323704f9fe00f4662897601d205df *inst/doc/cogena-vignette_pdf.Rmd
1291b7fd7076c3f29966cf678c1e5b98 *inst/doc/cogena-vignette_pdf.pdf
bce00e614b8e142797bcc2d5e18a4303 *inst/extdata/CmapDn100.gmt.xz
ccecd60a55f96309bd6b6b9730d97e08 *inst/extdata/CmapUp100.gmt.xz
7df2b5b959228f1b75e5f504adf40b8b *inst/extdata/README
6304192166634b94c3bb735edee21aff *inst/extdata/c2.cp.kegg.v5.0.symbols.gmt.xz
8368b7c7f271d239ded167c6ffaea10d *inst/extdata/c2.cp.kegg.v7.01.symbols.gmt.xz
27ad01040c14c7a93b84adfabda9ec41 *inst/extdata/c5.bp.v7.01.symbols.gmt.xz
8e988e62d5142941aca9ed1fd397e7cc *inst/figure/Cogena_workflow.png
45ed7810d91b2f20624c74dac89e6da2 *man/AllGeneSymbols.Rd
671a475d1a86dda453726910ecffe540 *man/DEexprs.Rd
6284ec4d85a3bc08db7f5bbde6ef1868 *man/PEI.Rd
c8f02dadfa6dd923474711d1d7b79ef2 *man/Psoriasis.Rd
6714477a71b9167daea49c8dcd2af1e5 *man/clEnrich.Rd
ad45aa9525e8106d82552e196e0d600e *man/clEnrich_one.Rd
767a609a2cdc6f49f06720aa248c829e *man/clusterMethods.Rd
8dd7aa30b9a4fb07ec5236a2c8009cee *man/coExp.Rd
ad07cd1cb762c6ff772a030d47e574dd *man/cogena_class.Rd
b3219601abb35f0acfcc1930316b98b0 *man/cogena_package.Rd
c5eb95f7efe0602a292e5d2d2c7dab6d *man/corInCluster.Rd
7ffe199f4335cba5270a3b6547605035 *man/enrichment.Rd
1a0890dd61628fee129a01df82d75845 *man/gene2set.Rd
0a95b704f5d9da4ad108a3cd3f6ea6d6 *man/geneExpInCluster.Rd
e454d5801ab4148e16b1c38b2d285afb *man/geneInCluster.Rd
dd81624a5ee912529ea37410e45254ba *man/genecl_class.Rd
d9f414d1d3c683d0ef3e35168eb3d09a *man/geneclusters.Rd
734889aeffc8b40308567c7a302d1c4d *man/gmt2list.Rd
caee77eab37ea72b1a3c9e456b4ffd34 *man/gmtlist2file.Rd
8f46792c36b3dd7ead1fb74cc6cbde82 *man/heatmap.3.Rd
5e92db0974ab7a325600f6c427ed2208 *man/heatmapCluster.Rd
cfab655425a080c124fa117bec1f3c74 *man/heatmapCmap.Rd
355b4e6666f6d0f1c6c79e9838ca8b8f *man/heatmapPEI.Rd
dceb15b5acfe6894878df56cebb901b9 *man/mat.Rd
7b15033d59ae9638ee8065be0da8380a *man/nClusters.Rd
77253b375b03e110e9c65b0faa8ec51e *man/pClusters.Rd
3f9e3cf14d9f65a7debe69221c61fc67 *man/sampleLabel.Rd
014f7a829ca938f4b32f945a8abd74d8 *man/show.Rd
7288f188fb89baf6d1b1c398c647c5bd *man/sota.Rd
d075b30d297f505d48644d2c5abe6096 *man/summary.Rd
95761721bc4f17f463d26dae4130fb9f *man/upDownGene.Rd
5c45ae250a3109319f9aa84991f9bfcb *vignettes/Cogena_workflow.png
45c06374a6687b307eae2d031fbf857a *vignettes/cogena-vignette_html.Rmd
326323704f9fe00f4662897601d205df *vignettes/cogena-vignette_pdf.Rmd
79f97614e1dcae1027fb7941bde4e272 *vignettes/custom.css
