25c22f2b5990f27a953d8f0882162abc *DESCRIPTION
d12bc998ba4dc9274c9556fc511c459a *NAMESPACE
596972e269e1722ead052b1ad6c6efb9 *NEWS
1d50ade797477422f6096a58df0ae5d3 *R/XevaSet_Class.R
9c3b95bb8b9e4ef73caa1893df1ed1e1 *R/access_expressionData_Functions.R
069bb8ee85f4cbc356e5842637271492 *R/access_slot_drug.R
34fe90b10509a1870f2f5e94bd4dafb4 *R/access_slot_expDesign.R
2414b9b1eb966025c7844556dde58286 *R/access_slot_experiment.R
b6c77fc840b95bb942b4f2daf1fc2ac0 *R/access_slot_modToBiobase.R
ad03606c4a9f92b5f29078099e53c134 *R/access_slot_model.R
506c9695723c8ea910df2966f6a91e7e *R/access_slot_sensitivity.R
a32cf05b9e3ae125220c61bc9d848e3b *R/auc.R
4410627744ac910ab33460eb54cc64ed *R/create_Experiment_slot.R
3f7d0bcb87161f02c8d5dac903a1add6 *R/create_expDesign_slot.R
4d1486713ecda1d0e117a37e282681db *R/data.R
e1396e9e7714abdb63dcc96562c2f24b *R/downloadXevaSet.R
550db7d938721384cfe520d601034ec6 *R/drug_Sensitivity_Signature.R
86052265ad77f91622c33279d1657a64 *R/expDesign_manuplation.R
1806adf4a688a402ff90476eb2806948 *R/geneDrug_association.R
4b3ae601b2b8cb936ed7fe69f4d96ba4 *R/get_model_batch_data.R
db29ffdf751708e0417399486e5d99a2 *R/important_functions.R
db5287ebee49da456eade97ced153027 *R/lmm.R
4a1ba1fa409f86d42ddf1703e415bedc *R/mRECIST.R
98cc0b352c75d9a4ded3838857352e57 *R/pdx_model_class.R
ff3749d30c32a5c3586f7990d9668cde *R/plot_functions.R
ab4b9b6ea59475826ed2f6a71a40222b *R/plot_mRECIST.R
ae674dd6964e71ee632788a7cffaedc2 *R/response_matrices.R
1a7ad8d601272dc7d53698d84a024ccb *R/slope_and_angle.R
90244b41f7a577a71024ac15a006aaf2 *R/subset_Xeva.R
dce214509bd0474d9f733e5f3d6dd7cd *R/summ_response_Function.R
565e64ae3c4b7c6feba8079b8be676f4 *R/tgi.R
00bc5875a7f01c05a6a3b7d3ca50ce48 *R/waterfall_plot.R
15f1d91b014e3526e02ac8acb238c911 *README.md
a989ab42ec8dfc59313c5aaa34c3d186 *Rplots.pdf
191587fb31ef6dca3322856f8ddaa6f2 *build/vignette.rds
11009f09afa278124e1af752ed53fe6b *data/PDXMI.rda
ef8d574b60b0845fe43398fe091698f0 *data/brca.rda
a2b588e4bb65cc5522bc97cc5c2f93f6 *data/repdx.rda
501d9db96ee45590a5f367d1f05af2cd *doc/Xeva.R
cca42ff06eac0f34063b531f845ceee2 *doc/Xeva.Rnw
8d46330b14b044e1dca58c8ac0016918 *doc/Xeva.pdf
6a08ced9fd18897a7f9dce0738d11274 *inst/doc/Xeva.R
cca42ff06eac0f34063b531f845ceee2 *inst/doc/Xeva.Rnw
dfcb13dd1c9736765451c40c2f18e2fb *inst/doc/Xeva.pdf
42cd0d1a6d959f293d99e6eb0d55d2a7 *inst/extdata/batch_list.rds
32b2374389886cb5d0b6f6a857a21c97 *inst/extdata/drug.csv
1dd15bffee5e8af2e53951503b9c8a1a *inst/extdata/experiments.csv
c65d5fee1a79ab72577e1177c21e0358 *inst/extdata/model.csv
37ab026457b7dd3e91d7f2bf27dce5f2 *inst/extdata/modelToExpressionMap.csv
a304075fbb31f1b1a40c2c265fadcfdc *inst/extdata/rnaseq.rds
d495de1a70ac6a3c453bc8eb47a95eb5 *man/ABC.Rd
e72eb551dc5d2d96fffdf92775e050ac *man/AUC.Rd
f2ab341a42ced82aec12b76c117b6d5c *man/PDXMI.Rd
45fabc676805de7f133caae15bbb7119 *man/TGI.Rd
79b34bbec522f6313a6a82772d429ca5 *man/addExperimentalDesign.Rd
7e503910ba69c7e2e0e93fa34e30e91f *man/angle.Rd
80940b5bf13dbeb4f657cef00d0584f9 *man/batchInfo.Rd
6be0bf77e295427f67720079040f7368 *man/brca.Rd
67916044481e1006f07e9410649f0f8d *man/createXevaSet.Rd
d87fae3cbc00ecfda83b585c522016a5 *man/dosePlot.Rd
450f47e5c6f43d1ac385dd3b252ee5ca *man/downloadXevaSet.Rd
d06b0056f24fe75294353ed037581733 *man/drugInform.Rd
c20261b1f9907cd15720116a08a07fc7 *man/drugSensitivitySig.Rd
86ac5ba06eece1265d4872569e8d6bac *man/getExperiment.Rd
63180a857ce9f90853dc869371bd9952 *man/getMolecularProfiles.Rd
08e6c50771a91b6856260eda2112a3e7 *man/lmm.Rd
9413b1df1bb8ba843066356583207d36 *man/mRECIST.Rd
ec05948387c93e088060586802fdab8e *man/modelInfo.Rd
9c31dffe3d066dedce85000765b85e03 *man/plotPDX.Rd
37cc072dfa27ebebe243a013afd9e683 *man/plotmRECIST.Rd
3557c7343c5fe227e6b3fb3021dd366c *man/print.batchResponse.Rd
dd1f2f435c900460569c3a5ade851ff3 *man/print.modelResponse.Rd
38620a07f073d36f04b190cdf83a43b8 *man/print.pdxBatch.Rd
ffe7eb35a96d2032da72eb69813e0b80 *man/repdx.Rd
9ee7dc0ebf6c87053dcbdbada9092981 *man/response.Rd
f431255b80d6febaa3c8a22e4c113bc1 *man/selectModelIds.Rd
6f7278625e7097087a50fcaf75401763 *man/sensitivity.Rd
80ab4b5b8114e53ace9275d8fcd19041 *man/setResponse.Rd
8d67bbeb24d967e2f481ae0d4d2ac61b *man/slope.Rd
f7fab629c85fc44ec4fd1807f13d18df *man/subsetXeva.Rd
90c053a529a53a0258ad83598ae9c06b *man/summarizeMolecularProfiles.Rd
c89b4e10d9173734aafdee40833dc5b3 *man/summarizeResponse.Rd
4e1b02e57a08251627ddb3dcc1778824 *man/waterfall.Rd
cca42ff06eac0f34063b531f845ceee2 *vignettes/Xeva.Rnw
e96e9b35e6c32e8823b7828e209c556a *vignettes/XevaBiblio.bib
9da70d42c00061b6c3219394d00a18c3 *vignettes/images/Xeva_batch_2.pdf
