5ec3d7d81ba10c91874428cbad751129 *DESCRIPTION
35e5c7d855287c3738ce8ca8526f7357 *NAMESPACE
fda1517b1e0a3e43480a019205299391 *NEWS.md
9bf8fc9c9c08c177701e6aefc2fb565f *R/ID-translation.R
0a129308627e69a0d107150dafb00d05 *R/TCGAbarcode.R
85c339b08bc3c3cdf5bcb5dd8becfcdd *R/TCGAbiospec.R
4e846de81c498873577278cc3fd7c5aa *R/TCGAprimaryTumors.R
96ebe1d7166cd94d0498befbd6d03478 *R/TCGAsampleSelect.R
a59088023d3db96426c49e75a271dfe7 *R/TCGAutils-pkg.R
7fa37c2c07f32b90ccd7a559501bd528 *R/builds.R
891329d256abb02186e446dc524584b4 *R/curatedTCGAData-helpers.R
ff57c166c18635d60b534012df4110bd *R/data.R
cf2ecdb06fce061132878e670046fe66 *R/findGRangesCols.R
f3aa58cb66a0229be6b8bef5912c4dac *R/generateMap.R
b695f572262ad48f50ebe589d63228ba *R/getFileName.R
4234ef3f3bfb530ca84a21debf321d7b *R/imputeAssay.R
973cb8a0c91946aebbde9d6934714b94 *R/makeGRangesListFromCopyNumber.R
f626cb9c23fabdce2cba834b9abc5b2a *R/makeGRangesListFromExonFiles.R
45cd1d015766c40e440622169460afaf *R/oncoPrintTCGA.R
bb175ecee163d7758fac95b1d946f61f *R/simplifyColData.R
16ad0bf5276d04feb5b4b070a7e596b0 *R/simplifyTCGA.R
106dd804ab563368fe9bfc46121a84dc *R/utils.R
9e543e446117eda5da8933b2925adb48 *README.md
fe9c8750c60294370718b458693c0cb9 *_pkgdown.yml
501111830bff74ae0fe67359d24cfeb1 *build/vignette.rds
1d9e8f8db94c4a0239cd374370c0b285 *data/clinicalNames.rda
d1de782fd93e5b3f09a78389c10aeb5f *data/diseaseCodes.rda
e328fbc555b3426a509fd87667fefdf4 *data/sampleTypes.rda
b8c43b5e5d4ff56b455384075b2d1952 *inst/doc/TCGAutils.R
faebf077a6a6880aebdcb5a3dede7ae9 *inst/doc/TCGAutils.Rmd
7a8fc1a52a2625fbf118f52c0cfe79c4 *inst/doc/TCGAutils.html
34c28c082227e3675fc08dfa9946fa83 *inst/extdata/blca_cnaseq.R
c54b22fa45a464bb6b507abe9b63f227 *inst/extdata/blca_cnaseq.txt
5d0b2e76777583fdfbd80282736fec67 *inst/extdata/bt.exon_quant.R
872fcb685f30213e28a22c8d2ad5e636 *inst/extdata/bt.exon_quantification.txt
7c64d39dbb2d9c10844e8b11c8338b99 *inst/scripts/clinicalNames.R
6279109b0b72e08a4d7f5596f1bdf936 *inst/scripts/diseaseCodes.R
c9593a603263adaaf07d39dc3a72f066 *inst/scripts/sampleTypes.R
81bb2b825c232691f0b5603f8254038a *man/ID-translation.Rd
8542c406a3bb1b99b064d3ea684cde29 *man/TCGAbarcode.Rd
8a092202468dd7670149d3fa610301c7 *man/TCGAbiospec.Rd
5f825e81171d23b7362812ca454f0713 *man/TCGAprimaryTumors.Rd
4f92a77c8c26db13b01ce13469f062f2 *man/TCGAsampleSelect.Rd
8f846863d213faedbf0ab14111759c36 *man/TCGAutils-package.Rd
5beff7a2757c78ae3960fda0910fcf80 *man/builds.Rd
691df73a8333de1707aa25cb323cfa83 *man/clinicalNames.Rd
6070328ad633b4a4d642ff210443b225 *man/curatedTCGAData-helpers.Rd
1105fc919e41cb31a71888d439294bdf *man/diseaseCodes.Rd
2997f523f8b645e94bb71955033d599b *man/findGRangesCols.Rd
54b911c24d1e2222c4bd33017d9baefd *man/generateMap.Rd
95ec9206bee028e5eaea3b656aabbe4c *man/getFileName.Rd
a7c654c9220ad097fadcfa6f68c30d33 *man/hidden-helpers.Rd
c4081b68f3c652da871eeaa686214b40 *man/imputeAssay.Rd
bb7b67fe1f3d42dbc3388a2a68847bb9 *man/makeGRangesListFromCopyNumber.Rd
1820a104504d05fb81b4d02249a2312c *man/makeGRangesListFromExonFiles.Rd
f728d29c2338982a8752df7ff7c7e7fe *man/mergeColData.Rd
1e81da0b471941547b942a5840663b27 *man/oncoPrintTCGA.Rd
d9078f1e9e51827c89bf6aef916900f0 *man/sampleTypes.Rd
20acc1d6630676215de1f7868dde4632 *man/simplifyTCGA-defunct.Rd
b34d2a3a3197a5f6b0e5a6ffed730e5f *man/simplifyTCGA.Rd
803a4e7a73f67fe5f27d8313299b30bf *man/trimColData.Rd
0d5fb0ea2161885c67815d83df5ad361 *tests/testthat.R
9fc6f51b311660a3399e0c4d984daecc *tests/testthat/test-ID-translation.R
ba1d7b6ad560b8846278e17f0af93411 *tests/testthat/test-builds.R
36ef04ceb7727effe51c87fdc1bff6c7 *tests/testthat/test-identifiers.R
faebf077a6a6880aebdcb5a3dede7ae9 *vignettes/TCGAutils.Rmd
