c031a0716ad1a127196136edc6d2aa84 *DESCRIPTION
d87e6d8759248cda6580878c9fa2271d *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
3373e56cddc3e776cbd3da235a8d243b *R/bootstrap_mut_catalogues.R
48fd7f4b3a754344f24ca3f493d21e61 *R/cosmicSigs.R
635fb82bbccf6f7286d469c6be911aad *R/create_mut_catalogues.R
088bcccc6c672c376d3e5fcb0724d653 *R/decomposeQP.R
c2feab6e9ef8fc4b2b64dcbe956f56d6 *R/get_context_freq.R
481b8f2feb2f66f7e4d30358c98bf279 *R/hg19context_freq.R
5da962cb2adc85b8d65c19d241673b15 *R/normalize.R
23c98e42f44d70b4def6da3dc6a451cc *R/plot_bootstrapped_exposure.R
32ee2b7659689a9ff772aaa8c4bb3f45 *R/sigProfiler20190522.R
65679c66e0d857eeceb87626a9b5d76e *R/sigProfilerExome.R
2d72fdb10a2af7914014f21c9815076a *R/signature_exposure.R
8ce3e580e7d97b5a162bf7ac0220f0f0 *R/summarize_exposures.R
bd6b195363c2f3811cbdcd5ee5ac9eee *R/vcf2mut_cat.R
c5e698cb323ec9758af211063833eca8 *README.md
5871817827f43f451fd7fdee5a65d46b *build/vignette.rds
9e2ab37bec3632cdf66ad67f0689bd39 *data/cosmicSigs.RData
3bfec948e0f3799dd7dd9360f3054817 *data/hg19context_freq.RData
d4413d744ef881b5954cfac1f71a8464 *data/sigProfiler20190522.RData
cd8e43bdb525e3900a8a8a9fbd55b7f9 *data/sigProfilerExome.RData
15dd68ebd929bfd7664e08bd07e501d5 *inst/doc/SigsPack.R
323ba04cb6ecf0734cb7733eb8c5da1a *inst/doc/SigsPack.Rmd
fa2e099f54c01c5240ab3fdb864c06fc *inst/doc/SigsPack.html
7b76930eb5c96c52e2fa0a8bc23f6c40 *inst/extdata/COSMICSigs.txt
892d7e8ba0e80ec8e603f99fd51956df *inst/extdata/example.bed.gz
f0ff93d1925688f2f6a9a966865a2423 *inst/extdata/example.vcf.gz
11c110ea39c49658f580b243d8de9aa7 *inst/extdata/sigProfiler_SBS_signatures_2019_05_22.csv
56f87a76794c9c42ab9dace9b110b557 *inst/extdata/sigProfiler_exome_SBS_signatures.csv
34a3308183d86eeb2fac4c5c4e80aa7b *inst/supp_tables.R
b6dd77427791b9fd1becd79524f2a1f9 *man/bootstrap_mut_catalogues.Rd
0921d9e472178e8bb3c2a8e299f6f2d7 *man/cosmicSigs.Rd
768afd217fa5900664385881905c070e *man/create_mut_catalogues.Rd
bd935b5d832d68f547b50cfd400d2521 *man/decomposeQP.Rd
190c9af7dba0b5400d6032dab2c69ed5 *man/get_context_freq.Rd
87b5e8904f1f8e8c5ec04479c105186a *man/hg19context_freq.Rd
46310e0295447e79c605858d484bb7a1 *man/normalize.Rd
fc3b7fd92841863154a214e8f12415f2 *man/plot_bootstrapped_exposure.Rd
3469bf04a440cb2a6f1590a7eb0e8ee9 *man/sigProfiler20190522.Rd
8b552933397e3d8b665754fff6e6925f *man/sigProfilerExome.Rd
e3ca8b9954c6da66e1602727b074d35c *man/signature_exposure.Rd
13669e4a44961eed9129dcb75b83b7ee *man/summarize_exposures.Rd
2d20fcdaf1fe2e5321fe88dd4da73f74 *man/vcf2mut_cat.Rd
323ba04cb6ecf0734cb7733eb8c5da1a *vignettes/SigsPack.Rmd
