b2b43c272e925e34f1c299eb54b3b8cf *DESCRIPTION
411d4587e77596e18eb03d80f51a90d0 *NAMESPACE
9aa6969001716602a80ae9918cb54f1d *R/AllClasses.R
4fafe45280043865805147c4a63f2c3b *R/SMITE-generics.R
f1b49a3a914cfe33bdf7426487d2f4a7 *R/SMITE-internal.R
e021c16ee365a6da9d568f77be008f24 *R/SMITE-plot.R
8b89bd65eeda4509143d0bfc1ad675fb *R/SMITE-print.R
36ccae7691d15fa6fa2dcbdcf397051d *R/SMITE-show.R
c99f7140dde0d5bddf0e58ee0750f2b1 *R/SMITE.R
dfb9bd93605b5f8a47384ae52888b231 *build/vignette.rds
38cca47418991b2684ed7676293718fa *data/Reactome.Symbol.Igraph.rda
7cad7147cdda7108649708ba8de6886e *data/curated_expressiondata.rda
1ce5829ab37ce958102abe34f032c8fc *data/datalist
49b9bb861891d87860e834a8cef80be2 *data/genes_for_conversiontest.rda
7c51be6885d59527d63a747594fc66f4 *data/hg19_genes_bed.rda
d704621802adc89cd09049e598ec1db4 *data/histone_h3k4me1.rda
778a3a64bc621b99865fe89800925937 *data/methylationdata.rda
ff8944de96240409ead7a921f6de781f *data/test_annotation_score_data.rda
13516e92edcee4903ff92bf46399189d *inst/NEWS
838b5d276a10615d8984ee05cdbddeac *inst/doc/SMITE.R
5bd0272ddce3e9b3e6848cac7d26c8f1 *inst/doc/SMITE.Rmd
bb7ac4cadfe274a0c1d483de7ab927a4 *inst/doc/SMITE.pdf
d972df97588bdae8a51db8057e756b59 *inst/extdata/hg19_symbol_hpaii.sites.inbodyand2kbupstream.bed.gz
45dca57cdce935baefb9d2c16486c4a2 *man/Reactome.Symbol.Igraph.Rd
f71668f79ae815495912dacbeeae6a45 *man/SMITE-package.Rd
b93dad5aa2ccf9ccef078e9cc620d58c *man/addShadowText.Rd
c3d7585d6bd052e2d0c23ca37adef4a3 *man/annotateExpression.Rd
14401a5b7da785a453191896234c0fda *man/annotateModification.Rd
34781ea5a89d3d5563952655cb1d21bc *man/convertGeneIds.Rd
5dda4175cdff1f3c20031ac312923fec *man/curated_expression.Rd
74b30b7400b5036a6c50477616306028 *man/extractExpression.Rd
48d7706293075b0b0ceb3aff673590a8 *man/extractGOseq.Rd
f9377fc177c04ef5c3d6d43a475bb812 *man/extractModification.Rd
3620ce82871b87ddece5fd8ebc778f82 *man/extractModules.Rd
0602f941416a339a4027263b2d4379bb *man/extractScores.Rd
007f1fe3c346d72b22a9053372900bbc *man/genes_for_conversiontest.Rd
e14420e37712b1a2df381d3609887b10 *man/hg19_gene_bed.Rd
c2ca142cb78bc6021e2e8450bbafe0c6 *man/highScores.Rd
805e63db42c43ffa143db170172a6965 *man/histone_h3k4me1.Rd
62c7cf317e4c812465a3bcbc7a3d831e *man/makePvalueAnnotation.Rd
9aa3694f51b5e8d48adfc8a08410ef67 *man/makePvalueObject.Rd
72d4c182f3c01c9c315421579f3696b1 *man/methylationdata.Rd
9a77c09de192d3a226a86d35cb652640 *man/normalizePval.Rd
927ab846ad60e6f1ae781dd11ddedad5 *man/plotCompareScores.Rd
540e4259b614e4422e843027fb51df9c *man/plotDensityPval.Rd
929cc5b736cb72f287d4bd9a5b92118d *man/plotModule.Rd
57f84d96e01c3ea72a95f1c387c722f6 *man/removeModification.Rd
18ad3c6590033aec10ea3161d61de9c6 *man/runBioNet.Rd
de3b8da7279b10c8cc2eeaecc300da02 *man/runGOseq.Rd
d5dcf24adbf097b3491a75fda28e33a6 *man/runSpinglass.Rd
51c3ab210b4adbfecfaaf7eb946e4947 *man/scorePval.Rd
a190319a6512a10912f432ef5474598a *man/stoufferTest.Rd
a84f8807086bbc941095725778d6aa3c *man/test_annotation_score_data.Rd
5bd0272ddce3e9b3e6848cac7d26c8f1 *vignettes/SMITE.Rmd
