5356b9ed4bb97d067addfd76f78fee0b *DESCRIPTION
0240db375da01a2efb202f2c5af2cdc1 *NAMESPACE
638349bc58574175c4da9ad59aabcdcd *NEWS
65fab973d472e1cabf492ca82b805caa *R/aroundPromoter.R
4fe096063e6c56510a58bd033a2561e5 *R/codonInfo.R
e910e9fc4cbce4beff3c8d3c3026c3ba *R/codonPCA.R
6dd401b5c3aaebc03e641ba9c013ebd8 *R/countShiftReads.R
7a4d068ae7003b78e288907c7fc73181 *R/countsPlot.R
205ca066c34615e64ded9ebeb888e0b9 *R/dataDescription.R
3bd2d7c7599404835d55ec0527cf6d81 *R/histMatchLength.R
2f561b32d0de19203de43a7f675e7ee3 *R/orfRelativePos.R
cde5f3ef31922188d0ab651052c16d55 *R/plotSummarizedCov.R
1dd3f0e55896980d03653e48d2734b95 *R/printPCA.R
fb70b67cc8c572e902744a81fcc77a94 *R/readStartCov.R
79077093bfb6bc123c1b883044ab3235 *R/readsToStartOrEnd.R
d2631f3ae4224abe2f74578e78a92999 *R/riboSeqFromBAM.R
15760dbee7f447a5ac2f5023539554af *R/utils.R
9e02cedbf3392f797465383a0e0efd7c *build/vignette.rds
8dc011d0d17a5ac5aa557f606037f15a *data/cdsPosTransc.rda
a1de93edef817bcc85d655f1bdfe4660 *data/codonDataCtrl.rda
53b69b40d258bcc3882038ae5075403c *data/codonIndexCovCtrl.rda
e73ada10789ca9413270e83dcb355871 *data/ctrlGAlignments.rda
f94846459f51cd3c21e51cb6afdf6ad6 *data/datalist
9f63189779687fc07798add5979cb1b4 *inst/doc/RiboProfiling.R
25961f6f60f70dc916789109d7abcfba *inst/doc/RiboProfiling.Rnw
8976062b97a16b1a3906202e76d7d208 *inst/doc/RiboProfiling.pdf
11a7a6e6bbd05e1b758db9c166f129b8 *inst/extdata/ctrl_sample.bam
b62a93c42bd35eeb8b19ba6e569b079b *inst/extdata/nutlin2h_sample.bam
d864c836bb939a0b946c514db3d4d584 *man/RiboProfiling.Rd
40fed04e9c0e4bc59ab766bc7e0998da *man/aroundPromoter.Rd
4a129e6528c3ab7b4bd51f0f975d2f1a *man/cdsPosTransc.Rd
3009457478ecd72556ee59a0c03c683f *man/codonDataCtrl.Rd
253b560fc322eb112644f2a2461dd48e *man/codonIndexCovCtrl.Rd
7b4946fc41d8ada4901eecc68608b79b *man/codonInfo.Rd
75a57f5637c3506cf147a7da44811c84 *man/codonPCA.Rd
faee96d39a28b4865bf09403679b4711 *man/countShiftReads.Rd
765b34494a8addd87f111204ad9901e2 *man/countsPlot.Rd
7ebb944e90f339657fca1ba95b7a6f57 *man/ctrlGAlignments.Rd
edd7cfbf8417df2219f74cd99ad6a077 *man/histMatchLength.Rd
b5b6ce6005ec549e4333ba96abd170ac *man/orfRelativePos.Rd
04d2ea21a9a3ddf1b2bfac291a013b03 *man/plotSummarizedCov.Rd
bb160b7628ab38aa4d290cb12785a28c *man/printPCA.Rd
7def1e755c241ee250a1f13a8c7b953f *man/readStartCov.Rd
63d0399a66851523ac5ab535caa68117 *man/readsToStartOrEnd.Rd
1f0933a7f85bb8f77848b91d95754ffb *man/riboSeqFromBAM.Rd
7f7750afb2521c671b3cfc8b0029a28f *tests/testthat.R
9f4d3f642172af3bd521e6d6d5c6bdfe *tests/testthat/test-aroundPromoter.R
f44252a857a7cb1333fde15757cbd4ae *tests/testthat/test-readStartCov.R
026384a5b3e38c41a58f875850d1f11e *tests/testthat/test-riboSeqFromBAM.R
25961f6f60f70dc916789109d7abcfba *vignettes/RiboProfiling.Rnw
