946a892e3900afe325f641b7f8530cb2 *DESCRIPTION
49a59a00a3471fdff2c53c37e1d1dfe1 *NAMESPACE
dcdc0d9df689e3a2858aa35d30cfb373 *R/Rbec.R
e29c140bc947ffc6f40f00449b4c5024 *R/Rbec_summarise.R
15ebe5016230c3c5d1758eb0820ee5b2 *R/RcppExports.R
26108912611155512933cbf0673851a7 *R/abundance_probability.R
53e12509555f34adafed75f3e6e01701 *R/consistent_error_matrix.R
2f5703b42de72ee920a82caa9dafe672 *R/error_matrix_multicore.R
13002e8e8f242bd8805ac5c668b21b43 *R/loessErr_modified.R
1b29bb02d0252da410ff38893c817d03 *R/transition_matrix.R
a1853348f5753f43311a64b1704928de *README.md
dfa69db6c4822a0a308b9e9917cae539 *build/vignette.rds
214a2e0cbb775b8de4a70de390de173a *inst/doc/Rbec.R
cedc91c853c9999f12c8f178349e9944 *inst/doc/Rbec.Rmd
c50bcf7ca4b44c2b8ed28e97e8e48b44 *inst/doc/Rbec.html
d2f8db428e8e0351ddfa5ba37c0b1a09 *inst/extdata/contamination_test/sample_1/rbec.out
6cf8630190b0ca6b5cb84a4e2d8f2482 *inst/extdata/contamination_test/sample_10/rbec.out
a996eb7b7dddc38576dcf585ca481593 *inst/extdata/contamination_test/sample_11/rbec.out
5cc460beb349c39746d808bf9e08ad52 *inst/extdata/contamination_test/sample_2/rbec.out
30983a985d07199b1b08a3c84c98a9bc *inst/extdata/contamination_test/sample_3/rbec.out
fba184fccd5f3fe030710674b42be754 *inst/extdata/contamination_test/sample_4/rbec.out
7b29649801260978610b0fa0f7b106ad *inst/extdata/contamination_test/sample_5/rbec.out
03a3bdb564090f2163b3eb2da641c448 *inst/extdata/contamination_test/sample_6/rbec.out
2ffd2368592dbce3bbaa1a3942e85ef9 *inst/extdata/contamination_test/sample_7/rbec.out
ab72b216d363f22a3b8a4e8309200167 *inst/extdata/contamination_test/sample_8/rbec.out
a9fe7922a244b52d43846c175f173f57 *inst/extdata/contamination_test/sample_9/rbec.out
3e2f61419fbc7371560f8613c55ca5b5 *inst/extdata/rbec_test.list
aafedee0d6401f7728c703f2cab51d2b *inst/extdata/test_raw_merged_reads.fastq.gz
a094c0cf8d7cb9384fb4523bf60823e6 *inst/extdata/test_ref.fasta
9239b0350698b6168109e3a2b229b289 *inst/include/Rbec.h
eadb99068e39ae1e0d297fd6fb285627 *inst/include/Rbec_RcppExports.h
d4c33c7e4dd82cff1a00af98f762e493 *inst/scripts/rawdata_description
9dbae9d99be0c0f5338034abbdc34598 *man/Contam_detect.Rd
017daa1210846f38cca9b1c19cba7c75 *man/Rbec.Rd
68e7e4b81ff71268a10385c431286085 *src/RcppExports.cpp
44332f5ba91e23fc0ac540981798679a *src/dada.h
3b623e2b83a1eb715c2c3307a23ea8ba *src/kmer_dist.cpp
6775a5ac0bb29bd766467eb51697f627 *src/rcpp_test.cpp
cedc91c853c9999f12c8f178349e9944 *vignettes/Rbec.Rmd
