31eed3c86132345f06220e7ba9f1870a *DESCRIPTION
c021ff1e997bb75f25d1640bbb793d98 *NAMESPACE
51d0bcbbca486b7e53f2d664f82460d5 *R/AllClasses.R
de6d05ac9e257e25e0db25cadc63b2af *R/AllGeneric.R
5d3fe1898504a0e53a676540d6d4489f *R/compareAnalysis.R
ff87944cd34918c8a17b8e8de9bd9229 *R/compareGenes.R
64c15b335c04be66ecffdc0c84bc0c61 *R/functions.R
3bf137151b997a70b3af683eb354b043 *R/functions_comp2annot.R
56c34b4f6680dd1778b4e67a536e90b0 *R/functions_comp2annottests.R
25b21e06bba97c8c89a3aaa47e72f257 *R/functions_enrich.R
3137395f3abeae4e34a166e93bceeb2e *R/heatmap.plus.R
be51c30a3f23900cd419cdd3cf3d2750 *R/heatmapsOnSel.R
7c8dc09973cb93cbe325706d5fa7945a *R/methods-IcaSet.R
774c2b5b67aceaa5c61652cc382e19f9 *R/methods-MineICAParams.R
ac850f794303b12743dddce8b276f501 *R/runAn.R
2af3b66dbd18e986ff2c89a9fff2a089 *build/vignette.rds
9d7ab8e7ad6491dbe066b6547fcfc5f5 *data/icaSetCarbayo.rda
5426a1c655479a0694500b6e8d65544b *inst/doc/MineICA.R
5ffe7240ec1dc9161df0ba7a3962f20b *inst/doc/MineICA.Rnw
5f86237aaec3c651920172aac90bd96e *inst/doc/MineICA.pdf
4a01e97309325f104657804aba03d6dc *man/A.Rd
e5d0f410a9dc0523ad079662305c71cc *man/Alist.Rd
5cfeae233f7b7efa989a35c266a58559 *man/Slist.Rd
2ebbafb91378f9be11f35cd3fc0e7960 *man/addGenesToGoReport.Rd
c46ebdea6d25bb9c5153e0c109c74212 *man/annot2Color.Rd
da947b2cbb277688ca6b56952fbf2352 *man/annotCarbayo.Rd
e03f48737bf107c3bc6504c9884a45c5 *man/annotFeatures.Rd
af32c4b9a8e86485a36ecdc938642c43 *man/annotFeaturesComp.Rd
8f042d86279bcdd5f76ac1f10356a4af *man/annotFeaturesWithBiomaRt.Rd
95f00fafb7b74ea12c1195c38d5a0301 *man/annotInGene.Rd
50bb33191930b33fa447a20667fca271 *man/annotReciprocal.Rd
1dfb349e3b43f241e6d7697556145a5e *man/buildIcaSet.Rd
83ace844712158efd4bc071e7936ad69 *man/buildMineICAParams.Rd
65e7903dc2f659edbbf0686b99ba4b03 *man/build_sortHeatmap.Rd
8004d30705a7cfdae8b191bf404a14e3 *man/class-IcaSet.Rd
89db5c911e30cdcb4d3ab9b6970dc505 *man/class-MineICAParams.Rd
923f62ce4cc320188bdd9f7bcc1cb525 *man/clusVarAnalysis.Rd
6520cae6094bc59831cc1a2c68a77523 *man/clusterFastICARuns.Rd
ab0b724f995c76be07a371ce1f11def7 *man/clusterSamplesByComp.Rd
9408185305e3248db312ad3b78e3a5f6 *man/clusterSamplesByComp_multiple.Rd
6fa77aee10a1503c8129822c426bcb8a *man/compareAn.Rd
b62964ce44dd033b4596ff945699e488 *man/compareAn2graphfile.Rd
1968d49237fcae693c26528d8d7f261d *man/compareGenes.Rd
613bc23019a114502d93127237bcc70f *man/cor2An.Rd
fbe6ddcce186acd330f7d5e5f0a73cb8 *man/correl2Comp.Rd
4cc9f41c6e3ec792d8b359e79e0e9288 *man/dat.Rd
5559565d6d3c5d51ddfdf7d118cdfb15 *man/dataCarbayo.Rd
f3ceb754828885402c9c2a7bd4bd35ea *man/doEnrichment.Rd
fb65b9febe57a6b8884bdea6887cb0e3 *man/getComp.Rd
e998ec17fc73d54b85906d82ae448b44 *man/getProj.Rd
e26741d1715d23d362804ea592c06f76 *man/getSdExpr.Rd
e023e7d5c40363069d01f92e8eb3263c *man/hgOver.Rd
fd28879e4d11d6c58bc554e4177c49b1 *man/hypergeoAn.Rd
1ae898ebe3c56db927befbe950fdf9ba *man/icaSetCarbayo.Rd
a0cd6f8b9a5a12068bb387cf0c7ace4b *man/icaSetKim.Rd
9f90618c76e6596f0b304f5b3136d37f *man/icaSetRiester.Rd
3d62ff425a7966a129e05f17e3134019 *man/icaSetStransky.Rd
5154b83300a4a55ed6be196d8790b5a6 *man/indComp.Rd
765ddb50bab2587cfd5037499e990f73 *man/mergeGostatsResults.Rd
14c9583539fd7445d74db6baacc1389b *man/nbOccByGeneInComp.Rd
e5b0ee1736e562438e447f576b844dbf *man/nbOccInComp.Rd
a2b07a02a6da3a5b263e1bab4fcb3a84 *man/nbOccInComp_simple.Rd
d3a8ebf81734445580571a4e85e4a42c *man/nodeAttrs.Rd
7975fc58329b43d30de87928f8598854 *man/plotAllMix.Rd
7158db5eac628eaeb520325da1878409 *man/plotCorGraph.Rd
d5517008204bc46f4fe934584d9f67cf *man/plotDens2classInComp_plotOnly.Rd
f1a83b02216b45bccaa21fd18f0ea833 *man/plotDensAllAnnotInAllComp.Rd
89517ce9d9688fb524ef47ddfaebed5d *man/plotDensOneAnnotInAllComp.Rd
8eecde086f96130f259713454404dc3a *man/plotMclust.Rd
bb438563560d3eb9000b67f98ed8a0d1 *man/plotMix.Rd
400bb6495738df1cf9291885bfee9289 *man/plotPosAnnotInComp.Rd
dead450283e1143b3cdcca0b7a9ad096 *man/plotPosOneAnnotInComp_ggplot.Rd
5312c6ee04af712098db45f978d57761 *man/plotPosOneAnnotLevInComp_ggplot.Rd
81f91c73bce3803a5ff5fc9ea5a31409 *man/plotPosSamplesInComp.Rd
2333a65320225d87417a771c8002d8a2 *man/plot_heatmapsOnSel.Rd
4ec76c140243e84c1d1a89d6417f991d *man/qualVarAnalysis.Rd
3351244adbca4d4c01dcb475bca98ab6 *man/quantVarAnalysis.Rd
9128ba37a07a140aa9b4fd2a2a7da2ba *man/readA.Rd
a8d16dfd7683f0c930e33723b1e48358 *man/readS.Rd
0fe6ab3c7c55c2d747b2cdab354a9693 *man/relativePath.Rd
a179edadfbb443333d47b003e72aff6a *man/runAn.Rd
15a35603fac2a222c2d0449e94600da4 *man/runCompareIcaSets.Rd
f41919e1df6a96fde63ba3ad628645ed *man/runEnrich.Rd
d26ef2855af8800e72fda0dc10903a8c *man/runICA.Rd
432787c6fddd89efb4ffa3485477327b *man/selectContrib.Rd
4d5594e0e2722b98569d467e77936081 *man/selectFeatures_IQR.Rd
d7d16a23b0eb4ea563dd157a1ecd3571 *man/selectWitnessGenes.Rd
585353ca7ca3fbee1e8f2c893857ba06 *man/wilcoxOrKruskalOnA.Rd
d549f79a8292016e59a4e1366d536fa9 *man/writeGenes.Rd
1900aa5e9ea2aca4e455c31eab5f95e5 *man/writeGostatsHtmltable.Rd
d6b8ffcded5b3709bb95c4cbc280ca9e *man/writeHtmlResTestsByAnnot.Rd
364c29ae17eccb67d5e363c07e002aea *man/writeProjByComp.Rd
247b2c9e678389ce3267af9aca053fae *man/writeRnkFiles.Rd
5ffe7240ec1dc9161df0ba7a3962f20b *vignettes/MineICA.Rnw
d68f59bcfcfb302ff751d42463244e93 *vignettes/bibli.bib
9c3e4f84447c765360fc73465eae9fbf *vignettes/images/2_orderedByContrib_zval3.pdf
4f1a2daf155e1c09135c06aff9c2c34d *vignettes/images/2_withDendro_zval3.pdf
edcdce0c45dad4f1f8a6d04d863552d6 *vignettes/images/erhist.png
7bb3931746d8690dddd9e10831633345 *vignettes/images/graphBreast.jpg
