# Generated by roxygen2: do not edit by hand

export(ORA_hypergeometric)
export(cluster_dynamics)
export(compare_dynamics)
export(compare_metabolites)
export(diagnostics_dynamics)
export(estimates_dynamics)
export(fit_dynamics_model)
export(get_ORA_annotations)
export(heatmap_dynamics)
export(heatmap_metabolites)
export(plot_ORA)
export(plot_PPC)
export(plot_cluster)
export(plot_diagnostics)
export(plot_estimates)
import(Rcpp)
import(SummarizedExperiment)
import(dplyr)
import(ggplot2)
import(methods)
import(patchwork)
import(stringr)
import(tidyr)
importFrom(KEGGREST,keggGet)
importFrom(KEGGREST,keggList)
importFrom(RcppParallel,RcppParallelLibs)
importFrom(S4Vectors,metadata)
importFrom(SummarizedExperiment,rowData)
importFrom(ape,as.phylo)
importFrom(ape,is.rooted)
importFrom(ape,prop.clades)
importFrom(dynamicTreeCut,cutreeDynamic)
importFrom(rlang,as_name)
importFrom(rstan,sampling)
importFrom(rstan,summary)
importFrom(rstantools,rstan_config)
importFrom(stats,as.dist)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,quantile)
importFrom(stats,rhyper)
importFrom(stats,runif)
importFrom(stats,setNames)
importFrom(utils,combn)
useDynLib(MetaboDynamics)
