ac75ec3b691ee90d224b40f37e14b272 *DESCRIPTION
af546c25d9c98a3428ac7a4e95e62556 *LICENSE.md
c2e1acc3a5fcbd5a87a6dba89f0d3d34 *NAMESPACE
ef08c5b82b0e8c68a11141b27d3a0cd0 *NEWS.md
694047b0d71085e2e2d03fb722dc5e6b *R/biological_integration.R
db7f8456c10a5ff02dc7bbc374ec6e32 *R/comparison.R
43ae0ce3fc5573dbfb990aef2e5c95ce *R/data.R
c9f4fab7b9fde7ab09d307f4e4b4687b *R/data_preprocessing.R
f1c492b15c51c5df480a95ce8f0642ce *R/net_and_modules.R
7af67dc259a7f7133c4b0834b9bd7e79 *R/netrep_functions.R
3903e8f80fb0a3cb484b8840e6324930 *R/topology.R
2e81aa5f855530e138d21815116c6ac8 *R/utils.R
007baef6d5f41debc29a3be76453f2a9 *README.md
74c8f1b20449765f24f390ee8096d28c *build/vignette.rds
4e5854ca4e1a3968f9cb059bb622bcc7 *data-raw/gtex_expr.R
5c61a41092199b14e0ded3cf2b0c4f84 *data-raw/gtex_traits.R
358362f99071ac621d8075e5633c95d1 *data/gtex_expr.rda
6bf1f4ed1db2c8c70ae5f3ad229c1be5 *data/gtex_traits.rda
f604ed4de2104c9e180efef4ab9c86d3 *data/kuehne_expr.rda
f6c9a3960b9670770851e2c2c2510e12 *data/kuehne_traits.rda
875d93b19fe4531295cd5b97a6599c2d *inst/doc/GWENA_guide.R
3a7989f17dab4e44198c252bbdb3d459 *inst/doc/GWENA_guide.Rmd
142393e9de96648b5c6a9272fbe66c64 *inst/doc/GWENA_guide.html
a5b09dcc957f2b14ceb56688dd2893c9 *inst/extdata/h.all.v6.2.entrez.gmt
04bdb4176df51a0730186a8784a733bb *inst/extdata/h.all.v6.2.symbols.gmt
4f5a44474d02fe81c29d6f0bb71ea0de *man/associate_phenotype.Rd
29ef34a9f0dec45ab868c388d88807dd *man/bio_enrich.Rd
2413f61b12cf125d8c52f286784ac75b *man/build_graph_from_sq_mat.Rd
ebdeca6feb5fcf81daa420f6ba96d98f *man/build_net.Rd
3439b068366e347e9ecfb46972efcbea *man/compare_conditions.Rd
fca5f520ddff4644057e97e41288327f *man/detect_modules.Rd
3e53b6086cea46e6866e0082624a0d19 *man/dot-check_data_expr.Rd
88009551e2f70dc838b88eddf5c6c56c *man/dot-check_gost.Rd
2e7b7a564df8d2e69e72c53349ff8fcf *man/dot-check_module.Rd
c025185478c31c0178b439302439d742 *man/dot-check_network.Rd
dd025a6dbd49bb4aa1d56abe22641eff *man/dot-contingencyTable.Rd
ebb2a8232572a0a9079f98b6b4d3fecf *man/dot-cor_func_match.Rd
b49a185ea2049691834feb6d4c1708ca *man/filter_RNA_seq.Rd
41622f59e2c33b93483377434414c4c1 *man/filter_low_var.Rd
0d829644769ef107cac5bab10232ff43 *man/get_fit.cor.Rd
ce6b07a689e9c955110cd832c79af194 *man/get_fit.expr.Rd
c3dbb1c10f104617204cf20d8d062aae *man/get_hub_degree.Rd
40a8dab02529b80bb4cc133bee807641 *man/get_hub_genes.Rd
b31953daf591dd87dce9bb68be34a2d7 *man/get_hub_high_co.Rd
cbcd6098546563d46ca41efc012f70a5 *man/get_hub_kleinberg.Rd
f98d7cc14c636b11c8d513a5308469df *man/get_sub_clusters.Rd
115e8a07581d2da8c962db6c864102a7 *man/gg_palette.Rd
429b3f58679f4c62bbe79ea00b0e63b5 *man/gtex_expr.Rd
c863422feb6c0ebdf29208eb3480ba5c *man/gtex_traits.Rd
6f729267da56012a140541ab79f062ff *man/is_data_expr.Rd
5af3c991ac1dac9169b81a5243d4ca42 *man/is_gost.Rd
f86f3797218c4a73cad3b9d89850628a *man/is_module.Rd
8217537b7eb10a543bef6b751c7fdc0a *man/is_network.Rd
b938f734e5cd33ed17a16818e520efe3 *man/join_gost.Rd
20f12783d7f33396af49957af097fe39 *man/kuehne_expr.Rd
f297d8d9f89e31b7f370d495c6127289 *man/kuehne_traits.Rd
f1c3e7888c93eadfc7fd638212afabee *man/matchsub.Rd
6ccfc986c949ea1592c17e5e02b20deb *man/orderAsNumeric.Rd
c2c75d9df8959bd3d427711d1e96da98 *man/plot_comparison_stats.Rd
c330f450b0051f2ae76806aa7d2540fb *man/plot_enrichment.Rd
31d53a3ec397dccb5bf723363f454aba *man/plot_expression_profiles.Rd
05e7f3745bc0be66a61b62a99362eee4 *man/plot_module.Rd
660b6d4ba2c14fab168e0e022d0581ef *man/plot_modules_merge.Rd
8a23b33884eaec65d62011ac6078e401 *man/plot_modules_phenotype.Rd
0fe2b9ae5ff8369c16076fc31047dc3a *man/quiet.Rd
feecb3dba1b40fa402d1f897a936cf78 *man/z_summary.Rd
4e95504c3d1c13ff9de87a8fa80bb4c8 *tests/testthat.R
a9b1290c48d0446dcba64c173c76a35e *tests/testthat/setup-GWENA.R
6359670260d2c78eee758f0b52743e57 *tests/testthat/test-biological_integration.R
8ba46ab04c60b56b37364bcb6c294162 *tests/testthat/test-comparison.R
d8e48d71a0105fdee828fd09518f6add *tests/testthat/test-data_preprocessing.R
57276e924be1c88cab059e8cdb78d15c *tests/testthat/test-net_and_modules.R
3a7989f17dab4e44198c252bbdb3d459 *vignettes/GWENA_guide.Rmd
202396220a375d389c2e52fc92835401 *vignettes/figure_pipeline_schema.png
