4c50ef71a33445ae045fbac433ace0e4 *DESCRIPTION
9926ec727f4a07ad169b514f356fdd02 *LICENSE
f25795d6f07bfacfea867f26058fbded *NAMESPACE
d92fd952e3c46087fa56e3dde3bd5ab7 *NEWS
60f5868258f11119cb189ab7c6a59dbc *R/EnrichedHeatmap.R
25f91654392b2e66368d11f4185c06a1 *R/EnrichedHeatmapList.R
7a519ec0eb9575d62030dec7b16b57f7 *R/Rcpp_interface.R
bb602729800b3cd25e02784655e08f46 *R/normalize.R
91589ff050fef1d7d2440baa7a30017e *R/utils.R
6c874c193ba648742e081b0df080a926 *R/zzz.R
f0dee659079dc3f814f157a26b48c277 *build/vignette.rds
64972ea21f3089b9ddd044d405118f5e *inst/CITATION
f565018137ad4253eb4e444dcb3f59fb *inst/doc/EnrichedHeatmap.R
bc90f4a56c138c91c6cbc71da8efd7b8 *inst/doc/EnrichedHeatmap.Rmd
0d50bdbfce76022718f0b67c87442fb6 *inst/doc/EnrichedHeatmap.html
317b3ef72d89129a754b6fb4cba12929 *inst/doc/roadmap.R
6e273ab74b1424f8029c3e782abebb5e *inst/doc/roadmap.Rmd
5a913030351b774cd2823030345e1a86 *inst/doc/roadmap.html
e3bf718c4e2cf94826cf0fc9c185c7dd *inst/doc/row_odering.R
196b32ffd60216275b730e86edf0269f *inst/doc/row_odering.Rmd
47ed6de6b6390e41ee05042f2248a925 *inst/doc/row_odering.html
ec0e3b12413e0a7befa3406c4acb58cd *inst/doc/visualize_categorical_signals_wrapper.R
1a62aa383f43ef87943910ab795668a0 *inst/doc/visualize_categorical_signals_wrapper.Rmd
895857f21920f12c2b51d4a24a4af5cd *inst/doc/visualize_categorical_signals_wrapper.html
887079dc98a6a85bf1bfec42843e6f66 *inst/extdata/H3K4me1_corr_normalize_to_tss.RData
1a2ee8f1e764a18c9a3375a0c6682cb0 *inst/extdata/chr21_chromatin_states.RData
ef652fab09a27598359ab410707088ff *inst/extdata/chr21_test_data.RData
a39ab5d0224b6cb235924680ea4b5ce8 *inst/extdata/neg_cr.RData
0806ca19a216ddd64a429e412f923da9 *inst/extdata/neg_cr_order_by_dist_closeness.RData
aa2b049ed47dba0053572fd94fc44053 *man/EnrichedHeatmap.rd
1bee11ad1def2b8f552f3695fba6ea33 *man/Extract.normalizedMatrix.rd
9cdade65e4eb2d2973e011680e3e3821 *man/anno_enriched.rd
77e294daec16768d4bdea76c2990fec4 *man/as.normalizedMatrix.rd
d0c4a230a97d591f31e58b049d6cb597 *man/copyAttr.rd
f8dd5bc445ddacd6622f0727da047637 *man/default_smooth_fun.rd
7814ad022b13ad787664b0a0dd6d7c7c *man/discretize.rd
5530e769f95f1124c79bc86e3414f47e *man/dist_by_closeness.rd
b088c54467802fc7f4415706119ac2b5 *man/enriched_score.rd
3c036b1296240b2776c52e5f6cdb656c *man/extract_anno_enriched.rd
bbaa2555da52d422d5bd4c68c4481801 *man/failed_rows.rd
bc42b20f90d93d6dd60fff8d0e70ea33 *man/getSignalsFromList.rd
4ff68af7a0967bf7f754520cd84c0061 *man/makeWindows.rd
d0da3e9d0a15227f1215494a66b1c95f *man/normalizeToMatrix.rd
36c5cb924863f233726de3a43e44248c *man/print.normalizedMatrix.rd
5a6f95638c3a73797fb2ae72ab899234 *man/rbind.normalizedMatrix.rd
9e3a09b11ec455b6878b9639d25b34c3 *src/RcppExports.cpp
1b790026b2db208be51a757d76ca16a0 *src/dist_by_closeness.cpp
a1c6c0f65fdeac45b356335712158d41 *tests/test-all.R
08cf116cd5651d14347b840773f7f2cf *tests/testthat/test-makeWindows.R
b6b798cc3262a1d644b6d4e722298c02 *tests/testthat/test-normalizeToMatrix.R
bc90f4a56c138c91c6cbc71da8efd7b8 *vignettes/EnrichedHeatmap.Rmd
12caeec1369cf61da6536cfb5f3c6f19 *vignettes/custom.css
687e1f81427f8da9389075f6e91a5e29 *vignettes/image/categorical_clustered-1.png
f7662392aac17a6474f35d57877f393e *vignettes/image/categorical_default-1.png
348e30c32c3594317130f5ffcdcb1be6 *vignettes/image/categorical_gene_body-1.png
7a3d803e1b18d0f5b33b1cd993d2c502 *vignettes/image/categorical_kmeans-1.png
484c16445bd635969aea965d0d928329 *vignettes/image/categorical_partial_kmeans-1.png
c252d2dae269788eaee6f7ba75dc4e67 *vignettes/image/categorical_with_lung-1.png
3fa1553292b4c16cec77318359863305 *vignettes/image/categorical_with_meth-1.png
8a11e46fae6e17755ac22b8feb8fe1bd *vignettes/image/tssbiv_chord_diagram-1.png
dde08066dcad294edafbb0621e3f75ac *vignettes/image/unnamed-chunk-10-1.png
6e273ab74b1424f8029c3e782abebb5e *vignettes/roadmap.Rmd
ce322742442204730e05daa6a3d001d7 *vignettes/roadmap.gif
196b32ffd60216275b730e86edf0269f *vignettes/row_odering.Rmd
9f620822765eaa8d8c36a24883005ee1 *vignettes/visualize_categorical_signals
a6d7f65e742d4741126dcf1df59475ad *vignettes/visualize_categorical_signals.md
1a62aa383f43ef87943910ab795668a0 *vignettes/visualize_categorical_signals_wrapper.Rmd
