bf50315692ce524638cd807b9455efde *DESCRIPTION
19dd4806c268df572426c6f9fb7d3e76 *NAMESPACE
b68f7535e9061f3f1ffebdc492c20e0d *R/accessor.R
210347aa48d33253630c59d0564095bf *R/boxplot.ChemoProtSet.R
f4fef516f0ba150f9261578346fa03d7 *R/corrPlot.R
23cda07392111e30d7a62b73c0869f34 *R/data_doc.R
4079868c90d600b68737c84170a436f8 *R/densityPlot.R
2564485aa6109bc0e967a914a79f91c2 *R/doscheda.R
089f824d8880043c7427aa80a4699c81 *R/doschedaApp.R
7892ade2def58bba7d4d278b662b32cb *R/doschedaset.R
ccb4ab5367cf5be26a09d78ba9f425d7 *R/fitModel.R
0c228f5f81264e012441855a46d1a4c6 *R/makeReport.R
5daf06ca9528ebeecd92a0ddf2d07421 *R/meanSdPlot.R
853b363933c294dff8b3d115e5657d3d *R/non_exported.R
6eb67fb1fa65496c0adc6807ba7bd8bb *R/pcaPlot.R
f155940db254381329cdec9a7a1e1c38 *R/plot.ChemoProtSet.R
3fab1fab32c98a47c31bb0f4f4af0a35 *R/removePeptides.R
30b37c798189042b38fc20d6decccf84 *R/replicatePlot.R
cb302a8c7bdfcd165fef66ded73cf996 *R/runDoscheda.R
e97a8adf2beb6e28d6c85b7f50c17890 *R/runNormalisation.R
f8227e40b36b3848b8b5e0254a7e0b93 *R/setData.R
75558237ebcbab89711edb930c7aa1f0 *R/setParameters.R
58951efecd1a0b28b66bd23bc153542f *R/volcanoPlot.R
121c1b07377b9e457d1f081823b85336 *README.md
665d84beca6251576bf925fb6384e402 *build/vignette.rds
8c6c836e54c655a20dbd7ec7be7f9cf4 *data/doschedaData.rda
b03e77efda3e41759fb787fb5ad6500c *data/processedExample.rda
c6e3cba184c8f3f4986d18e4f0b9bad7 *inst/NEWS
d3378f095e8e7da91c6e1ef1c291d1d1 *inst/doc/Doscheda.R
5e8f8ceee8bf415f16dcf9dc4f47c639 *inst/doc/Doscheda.Rmd
d07937a04892d569c21cd83d538b8743 *inst/doc/Doscheda.html
2605c448e963f63f1decaeec6484a0c1 *inst/rmd/report.Rmd
e7e477e266d01f742a94301be2d09a7c *inst/shiny-examples/DOSCHEDA_app/CRAPOME_ECOLI
57614dc29027d7db659f5cf649fc502c *inst/shiny-examples/DOSCHEDA_app/CRAPOME_HUMAN
11a377f1b6feacca77d32758d9719576 *inst/shiny-examples/DOSCHEDA_app/CRAPOME_YEAST
3c712b2434a761029f1542fd0924f37a *inst/shiny-examples/DOSCHEDA_app/KinaseFile.csv
61e35709dc845eea21cb731d517fafd0 *inst/shiny-examples/DOSCHEDA_app/Kinesis_ThermoFisher.csv
4617a63f269072d63b3068ba829b1342 *inst/shiny-examples/DOSCHEDA_app/app.R
66514aa3cdc481d31dcb43733d2fc10d *inst/shiny-examples/DOSCHEDA_app/introduction.html
f4ed7dfb9808bed9088403a578d53762 *inst/shiny-examples/DOSCHEDA_app/report.Rmd
8f62f4da15d170fbace0d46940a4e7b6 *inst/shiny-examples/DOSCHEDA_app/sigmoidaltext.Rmd
770d42667fcf33e87a2495374c45fda1 *inst/shiny-examples/DOSCHEDA_app/www/doschedaintensity.gif
1109613b6e9eb896a2f8e5b984ba0497 *inst/shiny-examples/DOSCHEDA_app/www/logo.png
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5956feef596318d9a73d904b6b155212 *inst/shiny-examples/DOSCHEDA_app/www/stage1step1.gif
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a70064f303cb7d4c01ba09acbe29965f *inst/shiny-examples/DOSCHEDA_app/www/stage1step3.gif
d9bdb61d9bc3af5797249cf253cd519f *inst/shiny-examples/DOSCHEDA_app/www/stage1step4.gif
4feb0eb09380c7b0856873108a34b399 *inst/shiny-examples/DOSCHEDA_app/www/styleupdates2.css
81c34a700a8ada7e8a0eabb55b45c52c *inst/shiny-examples/DOSCHEDA_app/www/titleogo.png
2cc7fc7564ceb336b070551d97619621 *man/ChemoProtSet-class.Rd
b1752fbf6c8e93db77928ad1c72d1def *man/boxplot-ChemoProtSet-method.Rd
092cbfb4727fc982c77dc0f8a5ff77fb *man/corrPlot-methods.Rd
b5fdb98b73c40e37bbe6dc9421da92cb *man/densityPlot-methods.Rd
c6825b78bd600f03d29bdb528ab10ef5 *man/doscheda.Rd
96d568518f8ad640a4f6e1b21ebe2e31 *man/doschedaApp.Rd
e3b2b3a8751377f7fcfd5d149ab474ff *man/doschedaData.Rd
615bd5ce7d9d82d805b424f6f8aa7768 *man/fitModel-methods.Rd
6a2a65a99548201902c7503124744607 *man/getDatasets-methods.Rd
6e2b9fcfab261aa82b552465a51f741d *man/getFinal-methods.Rd
f21f56ee3d5cc3e3c5268d4401583a76 *man/getInput-methods.Rd
0656006f4e135f8259967e2837771c54 *man/getNorm-methods.Rd
4f8be950cbc342421807cf1f47a547af *man/getParameters-methods.Rd
b858b8a53fa73de0a078c8129a085541 *man/makeReport.Rd
49e261f605c766efd07b3cf479d9b9ae *man/meanSdPlot-methods.Rd
dbe785d2d2be55958c6581f337e68861 *man/pcaPlot-methods.Rd
e51b87875f8fc7e6305bb8e93060f03e *man/plot.ChemoProtSet.Rd
f5ef4d97a17c752564f4f5d8ccf18ab3 *man/processedExample.Rd
6dfd794fabead8ab2447a861482025d6 *man/removePeptides-methods.Rd
de4a245df1c3c785952b1a8ab6ade518 *man/replicatePlot-methods.Rd
e5d177dc210244421f040b95101b8c8f *man/runDoscheda.Rd
e3943785300e3d3804cb87fa61260142 *man/runNormalisation-methods.Rd
4167867d36f97951a3595151438aa0c9 *man/setData-methods.Rd
f21899f606ffa5a66cb286dbfe1948d8 *man/setParameters-methods.Rd
f546dd98ffbc7c66c97a085f00ac7181 *man/volcanoPlot-methods.Rd
b2fcc728f863fb8c8f87186cc7d21424 *tests/testthat.R
bfc6bd345765cb4b745980a850d4a678 *tests/testthat/test-normal.R
5e8f8ceee8bf415f16dcf9dc4f47c639 *vignettes/Doscheda.Rmd
