eb4d27f6cb4cbce70156781f8e65dc19 *DESCRIPTION
db840703c35812deb50f4dd28629ac4e *NAMESPACE
7d3c2dfa4ed88be13ecb61f17ab71f38 *NEWS
b26dd2ca4f83f4ab33242c6700770b4f *R/DRIMSeq.R
4f7778b678d90489b198289ad508c852 *R/class_MatrixList.R
eb7f6f2af1c865265d207bdfeb37e1b2 *R/class_dmDSdata.R
edcf7fc6c8c3be8a2f7e548ac6329353 *R/class_dmDSfit.R
376db9fb99714696ebc3a5e06ae6952c *R/class_dmDSprecision.R
dbc16aa52726f23aae10955acd3293fc *R/class_dmDStest.R
c4e607e8f3b2dc013fdc8625ca90cbcc *R/class_dmSQTLdata.R
205847ef5f8d8b74f02b28f163994c27 *R/class_dmSQTLfit.R
73e45e5bd4f64ff0ff79936ec7dd76fb *R/class_dmSQTLprecision.R
d851e5acbda25152cef405d237ee9cb7 *R/class_dmSQTLtest.R
ef9a90d57e9220a04f53ac2b67dbbcff *R/class_show_utils.R
3dec5c07ab5fb370cc5d6b6f3c41216c *R/dmDS_CRadjustment.R
50b75fcab6150e7f6175e51eb9ddf023 *R/dmDS_estimateCommonPrecision.R
6d01dcdf92c2280f385962eb078e46f3 *R/dmDS_estimateTagwisePrecision.R
4061b6effc8733b4836c44b66a62ac6e *R/dmDS_filter.R
00ffd84a822f1a66ecedb3c73dd61428 *R/dmDS_fit.R
854b8bfdbdf95214d8648962a65eb260 *R/dmDS_profileLik.R
233b916bb66be5b89e0572e0a9593fdd *R/dmSQTL_CRadjustment.R
4fb514aee35d102677df95959b4b06b1 *R/dmSQTL_estimateCommonPrecision.R
b14b1cf79292c55021ae1c4242058148 *R/dmSQTL_estimateTagwisePrecision.R
d6da8b7d364caf06b0b578555fbed146 *R/dmSQTL_filter.R
e98c6422d72246538b2b9053aa40d8ae *R/dmSQTL_fit.R
f81b1244c47c171718b839d57cd59d53 *R/dmSQTL_permutations.R
e495df0f854b5b70559618ecdb35f387 *R/dmSQTL_profileLik.R
6be86b7a2e991c65c442ca79e2463a8d *R/dm_CRadjustmentManyGroups.R
cf9b9cc22e1ef1c0935a96f8f6d63771 *R/dm_CRadjustmentOneGroup.R
091f98644092f1544e888225ad4d86b3 *R/dm_CRadjustmentRegression.R
ba125d1bc261ba4b53360f0154b1eaca *R/dm_LRT.R
e7672f4839330055becc6851269df5ea *R/dm_core_Hessian.R
55d426df69a8aad2a987627cd7f82d8d *R/dm_core_colorb.R
aa3c2cbc1ad0950792cfe6573984221d *R/dm_core_deviance.R
f3ea68655c1e326e028724d17ebebc67 *R/dm_core_lik.R
0860610995bbc54e044a15ce1255715d *R/dm_core_score.R
c738cf0bd27a0a5c5324fcdd9d4f0ca0 *R/dm_estimateMeanExpression.R
9e2406be3bcfb58c78fc1f8477aaaa2f *R/dm_fitManyGroups.R
4f84eb0b7d527537b86ea1f75f21a0a3 *R/dm_fitOneGroup.R
ef105ba6d44dd5360da4a7ae9f80164f *R/dm_fitRegression.R
1db1733e9380aa1a5a856a1b5d012448 *R/dm_plotData.R
792e91c762d0f103ab581151ee91a467 *R/dm_plotPrecision.R
582d746911fe03bffb869d8e754c383a *R/dm_plotProportions.R
69674880adefac45b928ecc0e7047d01 *R/dm_plotPvalues.R
5e4a0f8823ec8116c4293760925e8f99 *R/dm_profileLikModeration.R
49a70d17a95eceed2e42d4dd970e2a63 *README.md
33d38043791e38e3fd24d29aff6f9cb4 *build/vignette.rds
c04e7804b9fbc76d39fe8d03938e867f *inst/CITATION
af8116f09cf866a8910f321684b83c75 *inst/doc/DRIMSeq.R
b52ef2a22355944d60f3167c13c166a9 *inst/doc/DRIMSeq.Rnw
495a3fc10df557053fd36f175dcbb835 *inst/doc/DRIMSeq.pdf
7cc16a0e0f38a412fce342761870866b *man/MatrixList-class.Rd
d65585b968165c712404ff5bfe8b7194 *man/dmDSdata-class.Rd
d1e743dfdd7222b8ef91117bafc54757 *man/dmDSdata.Rd
df78f530f400950425391d1811827643 *man/dmDSfit-class.Rd
5e787c8ff38c17f28098a52c9256afb2 *man/dmDSprecision-class.Rd
dd2be32cff17b12c7b7f90df8b1fc6f6 *man/dmDStest-class.Rd
4dcb5f63b8ff6a4f0e13287d40b1d220 *man/dmFilter.Rd
58fddefa5ab0830fe1dbba1ef8634888 *man/dmFit.Rd
8160321877c06baca3e3879f06edea39 *man/dmPrecision.Rd
aa278806d7769e77668911ff79847215 *man/dmSQTLdata-class.Rd
dd1e9145c25faf31a6617895e497caab *man/dmSQTLdata.Rd
b624199a2e08debdbeaf9cd9de8d55d0 *man/dmSQTLfit-class.Rd
1d6a99e22e302b5c89135784660f29bb *man/dmSQTLprecision-class.Rd
c2238e9a2a0f4570104d28a413bb7aaa *man/dmSQTLtest-class.Rd
4f00239eebfee78bb3034a472b31118c *man/dmTest.Rd
5b8e6bb608cb55ba07a78e7b65d41778 *man/dm_plotDataDSInfo.Rd
62838a53de2615a529dfbc85dc6d9eee *man/dm_plotProportions.Rd
008242fcc12baa8bad5da9e0076f020e *man/plotData.Rd
a1c733b13c20dd1d7538cc3538555834 *man/plotPValues.Rd
3d13d7989e8437df55c076ed8d1eb1e4 *man/plotPrecision.Rd
25523d6a5b9a6beadf3eb6eb38ced36f *man/plotProportions.Rd
7dc776b3e4165d707e3fc81151b9164f *tests/testthat.R
a506cc02e276837e39ffae9dfa580cde *tests/testthat/test_MatrixList.R
7b3b9b6715a0b7ba12c4a7a3cd03f83e *tests/testthat/test_dm_adjustment.R
196c0973cd01e70d7a0c1cea3c20c222 *tests/testthat/test_gene_filter.R
c98ed71e800c41126d5b98c8d367d2aa *tests/testthat/test_lik_score.R
337e9b8a0487f6bb392c003802ca9a48 *tests/testthat/test_total_switch.R
b52ef2a22355944d60f3167c13c166a9 *vignettes/DRIMSeq.Rnw
4d51b6c2d60e8d7e9abb93725b2c5824 *vignettes/References.bib
