15875bee67bd9ad5d9870135f52cf3da *DESCRIPTION
d7eb757c1b2c63bbf65961c416b9c371 *LICENSE
8bbf9675f2bc933c0072873f3011a994 *NAMESPACE
ac96be7565bf9eba92e3ba89edd48e03 *NEWS.md
e39a61df19db1d9806b423d166b92a2a *R/allPeptidesPlot.R
4e8c7e018ed7b2728043796c87a729b2 *R/assignClusters.R
ef2e8ba9567c29253495313e5a0dcc47 *R/cleanData.R
e365126b87e0cde620bbe031409acc3c *R/clusterComp.R
6779f4cc1a2ea4086d1c79a52e350d85 *R/compranApp.R
dc5cef4c8b35cacc00187fd7809de742 *R/exportClusterAssignments.R
4976d0c6a9115468c52a0e2e201b41b1 *R/extractRepPeps.R
844b8ccfc8197ada30f7e21d3070db57 *R/getNormTable.R
eb4c765f9a3c442392a1b4c034240d17 *R/globals.R
526522b644c46c7ad4d0c94c56487189 *R/groupHeatMap.R
d9261196e215cfcccf871491c82ddfa2 *R/makeBarPlotClusterSummary.R
4b747c86dc862feed00af867ec07a9ec *R/makeDist.R
3e2df67144448542e107904d6f08163b *R/normTableForExport.R
453b2df881e9fe3176511e5dfdfc3f03 *R/normTableWideToLong.R
6341425780e7e222a6306d370809c457 *R/normalizeTable.R
76ac014d767d2be54c81849b4def264e *R/oneGroupTwoLabelsCoMigration.R
154228e1e6a21dbea1c63c351653d579 *R/onlyInOneLabelState.R
4b66378257d37451e6f67bf82832508b *R/peptideImport.R
dabdeb1a7503c1d51798db696c900f84 *R/pickPeptide.R
4cf19388c67f8a6e0e88d959d3f3f768 *R/protImportForAnalysis.R
8a8c4b0188c59eaae2ba6a0c4daab832 *R/proteinPlot.R
2b2f577186c6ef8f83f1b05ba7645837 *R/simplifyProteins.R
9481c4645c14d9c04d9a05c98ef3bb69 *R/splitModLab.R
75acbd6ce5310d63009826ad582e313e *R/toFilter.R
90f3c15ed9dd292941790e1c4b661e72 *R/twoGroupsWithinLabelCoMigration.R
51252ec264c56e4ef81d4d30ef3df1b2 *R/uncenteredCor.R
13667c1bf7c99326567ab5a86bd8c5c7 *README.md
285c4229d589777150ac66f31f6b6bfa *build/vignette.rds
8abfbf70d54ee853c7b4a36359a1fabb *inst/CITATION
bbb9effc56043dd402fe54e4c820d52f *inst/doc/SILACcomplexomics.R
be330d356001c503a6a0d11a9c56a657 *inst/doc/SILACcomplexomics.Rmd
93037dc5f8ec9aacf8bafc59f980f8e0 *inst/doc/SILACcomplexomics.html
510e48efb2831b36ae8413da07fc1a55 *inst/doc/fileFormats.R
07162c3b5dc95c84d046cc00cf464ae3 *inst/doc/fileFormats.html
f77704cca0bd8a2ad69c7a50b700e9b1 *inst/doc/fileFormats.rmd
59966d4fb68950b9fd347b0b9a491f09 *inst/doc/proteinWorkflow.R
758a1b58e8bc0904b0fafb7821b0e5a3 *inst/doc/proteinWorkflow.Rmd
dea7b28404f5b67163a01cd54c443f8f *inst/doc/proteinWorkflow.html
d178c115c05c8c2721d19e2e8e35943c *inst/extData/data.txt
16bae3c4c83e453743d9f6c58e1d28ba *inst/extData/dataNormProts.txt
9b217212dfad72b4122f836534f3375d *inst/extData/exampleGroup.txt
a50ef68a830d745c93bf049114b19fee *inst/shinyApps/ComPrAn/app_components/body.R
f56e8bb079123f88cd2d798884c30712 *inst/shinyApps/ComPrAn/app_components/header.R
09a1e233afde524ac04132dc707ca970 *inst/shinyApps/ComPrAn/app_components/sidebar.R
fbb0d6d57e140f3ac21f8e1983a5e40b *inst/shinyApps/ComPrAn/global.R
94a933ad75f4138e87b2f7ebd4bf9864 *inst/shinyApps/ComPrAn/server.R
de1df2ec1be321939f94ad6adef309da *inst/shinyApps/ComPrAn/ui.R
7fe5faaae0fe71c9ee1f18742f5ca2d4 *man/allPeptidesPlot.Rd
8532947b1277e1437372d892225f7de5 *man/assignClusters.Rd
f3486e3cf1738c66266fdd252ab23ce6 *man/cleanData.Rd
df15796fbdaa4e00d71d493592607cba *man/clusterComp.Rd
793a2d0dba258436cc7ae57a3df2e465 *man/compranApp.Rd
9c1b5693eed0946b48f6b3960928473b *man/exportClusterAssignments.Rd
4376ed1dcafd5b29360639a80c4bb61b *man/extractRepPeps.Rd
575d44153b3587a86bfed467e8754f8f *man/getNormTable.Rd
b309af8a86e90a8399f63522ffe98a5a *man/groupHeatMap.Rd
c88675b048048ff6888afa856407708c *man/makeBarPlotClusterSummary.Rd
46f53056a5ec86a8362facdd8842d300 *man/makeDist.Rd
da2df7db1a40d603f922e477cd593f82 *man/normTableForExport.Rd
24a616592345abc618f5ecf7af588ba9 *man/normTableWideToLong.Rd
4c0452bb3e21e752ab3ff8499171d9a4 *man/normalizeTable.Rd
6b9bf7c026b245db8c9f3c2ce6c548b9 *man/oneGroupTwoLabelsCoMigration.Rd
9005df8dd65b19d3619023992414b1b4 *man/onlyInOneLabelState.Rd
ca0cf09e73b75b8831313d7da29073d1 *man/peptideImport.Rd
f220691c6d68a36a158b3a3e8e1b8e15 *man/pickPeptide.Rd
c41f0b42d92379d81043174d32025717 *man/protImportForAnalysis.Rd
89ae5f817c49a4264054e5cf9b7a45c5 *man/proteinPlot.Rd
7cd676114e26cfc10706255cd91e5f37 *man/simplifyProteins.Rd
6420b06549f4fbc31fb99fedb1342ac6 *man/splitModLab.Rd
3ab2b8819e3e6ffe147172c9ddfc81e0 *man/toFilter.Rd
9a3715c22051376372dfcedecebf9c3c *man/twoGroupsWithinLabelCoMigration.Rd
8fd2fa214d1b5da5eca59bfe55b784d7 *man/uncenteredCor.Rd
cce978585df27154d9a3f0d89ece418c *tests/testthat.R
51ebe5cc38850f6054ac50545cd95537 *tests/testthat/test-proteinPlot.R
af043d667220a15ef9803a2822e59418 *vignettes/PackageWorkflow_small.png
be330d356001c503a6a0d11a9c56a657 *vignettes/SILACcomplexomics.Rmd
f77704cca0bd8a2ad69c7a50b700e9b1 *vignettes/fileFormats.rmd
97460ea173182174a6df1babe23013d7 *vignettes/normProtInput.png
ebf61ee1d84860c5d3cf58a60024f584 *vignettes/normalizeA.png
3c70f8392bf46c89b0c69a9bc9ae5024 *vignettes/normalizeB.png
1a772f877ee8d1e577bdfc5e8a0347fb *vignettes/peptideInputFile.png
ae05e6716284fa42878e982f12c6a323 *vignettes/pickPeptideA.png
30291dd8386e4f13a1e404464d18e9c2 *vignettes/pickPeptideB.png
758a1b58e8bc0904b0fafb7821b0e5a3 *vignettes/proteinWorkflow.Rmd
