63d81f639595f3a0c9d70e83ce04410f *DESCRIPTION
0da8c31efd5bb43037ad35269484f956 *NAMESPACE
6f5727f81c22e3772bc347dd9a0562ae *NEWS.md
6a41ed38c38798ff8a8b3b792ea8b8c9 *R/AllGenerics.R
75673abc3a9bd09cd892603a1a7d8928 *R/CellBarcode.R
4b08e3c3d2ee9c5afdb44ab5ae5294f7 *R/RcppExports.R
e4ecf5080b09cdaf3710bdbb68a81fdb *R/class-BarcodeObj.R
16a587fe12573df9a7810d7a537f8275 *R/class-BarcodeQc.R
208e31fbf56d0eb2c8dffd8e8bc54f06 *R/function-single_cell_seq.R
145e942d7222d8f5b5a5a3c9b6993918 *R/function-verify_seq.R
5bd35bda4c5122b6b7f02dfd2a045e3d *R/method-BarcodeObj.R
aecb48c20d5f337d00ddb65969c5cc9b *R/method-cure_barcode.R
f984dc8823e23cd0cf1aac89367f7409 *R/method-extract_barcode.R
5efc9a8608efb0959006777dc6b42713 *R/method-plot_barcode.R
0c3042ee565bc7115159a0e7f046812b *R/method-seqQc.R
6dcb6ca8a395132fe205a31074929f23 *R/method-summary_barcode.R
3f0c1be6f57ee6f83310b91ebc834310 *README.md
43c64ff2dfa57a81b74add191f50eba3 *build/vignette.rds
f675953cc63fa2395deede24d931a1cc *data/bc_obj.RData
e6f3f4b799552ac2faa13052a1ae24a6 *inst/CITATION
bae90e367844f0fe6589c0acd6b8dbc0 *inst/doc/Barcode_in_10X_scRNASeq.R
9a2b0fe02ee09f937e099716ca952e58 *inst/doc/Barcode_in_10X_scRNASeq.Rmd
9cb0b0b66dc83879717e51325e3bacd5 *inst/doc/Barcode_in_10X_scRNASeq.html
539e0b8bbe7919a1d63a1427833251dc *inst/doc/UMI_VDJ_Barcode.R
b5687c63488b5e1fad077141fa0c7a83 *inst/doc/UMI_VDJ_Barcode.Rmd
b7a6cf70a05982f9f07c367030fa8ebe *inst/doc/UMI_VDJ_Barcode.html
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ad8955d0c7ab453a2f13bca5a6891cb0 *inst/extdata/mef_test_data/5290_2_BCM_50000_mef_mixb_GATGTGT_S5_R1_001.fastq.gz
79b56c53d89a0b161f1752e88dbe4e74 *inst/extdata/mef_test_data/5290_3_BCM_12500_mef_mixa_TGCCTTG_S4_R1_001.fastq.gz
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ad86bc5d517592d27e6706c7e4cf7e77 *inst/extdata/mef_test_data/5290_5_BCM_3125_mef_mixa_GCTTCCA_S9_R1_001.fastq.gz
55e036e854300b258b17d4e2a8e7afe5 *inst/extdata/mef_test_data/5290_6_BCM_3125_mef_mixb_TGTGAGT_S7_R1_001.fastq.gz
5a67c031600b366e8dac1084afee7a10 *inst/extdata/mef_test_data/5290_7_BCM_781_mef_mixa_CCTTACC_S12_R1_001.fastq.gz
9d8f1097213fa06631e3e34d590b10b0 *inst/extdata/mef_test_data/5290_8_BCM_781_mef_mixb_CGTATCC_S13_R1_001.fastq.gz
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1013143fb860fbbddd2a9259137f6f2c *inst/extdata/scRNASeq_10X.bam
815fdb4bd3199061fe28c6747803504a *inst/extdata/scRNASeq_10X.sam
428ff5b2689d0d5239ac8d6366cfded6 *inst/extdata/simple.fq
75ecb1d5b123a2033262a49532c4d8bc *logo.png
72b495e3a5b81e1390de182a831739e2 *man/BarcodeObj.Rd
031edfba65ee3efbe32f6e6e82c1ee96 *man/CellBarcode.Rd
e8bfa4fe74d8a32816a70fcc4c6286d8 *man/bc_2df.Rd
40627cb6480b7c9a1bd6eea858e957b1 *man/bc_auto_cutoff.Rd
cc24b5a2bf6ce5e984d77d64eb2d4af4 *man/bc_barcodes.Rd
848e57ab661a75922b49aecf9d9fbcc0 *man/bc_cleanBc.Rd
1f67973ade84544379df8674d116a683 *man/bc_create_BarcodeObj.Rd
50a9f4c194c0ef85d29fd644519cde77 *man/bc_cure_cluster.Rd
234e6c64ae18715a0198514db543fbff *man/bc_cure_depth.Rd
915c3bb5c3c1945cd9b5645e1ad3e29e *man/bc_cure_umi.Rd
67020b65ee17b0ed8d2c919a3421608c *man/bc_extract.Rd
6ce7936c650df859ec338b859783575f *man/bc_extract_sc_fastq.Rd
cce83c51a04b4f6010150e62a16e438b *man/bc_extract_sc_sam.Rd
1b9e4e7d2d1826693da7995da21a5815 *man/bc_messyBc.Rd
bc53b1d44d5cca4e598de3ced85db9b2 *man/bc_meta.Rd
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4606d81015ed44926e6b742d84b839f4 *man/bc_obj.Rd
6ef73d851ef56a39b9f1b09cfbb3fba4 *man/bc_plot_count.Rd
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79054f30cbdd89e654a0f632e9224788 *man/bc_seq_filter.Rd
fd9b2c26154363ecef5d97b087ecf430 *man/bc_seq_qc.Rd
b56e0b5f007f300781017c815cb3014b *man/bc_splitVDJ.Rd
409bca32e32779b91d0a04894e484538 *man/bc_subset.Rd
68c64940f1cb886a57b886ca29cd8616 *man/bc_summary_barcode.Rd
6db1833080f05b9d8d759f502990c40c *man/bc_summary_seqQc.Rd
66254ee7c5618ae38478de2b99328cab *man/format.Rd
c2925cf8013a4192dd57ed32c6fd2430 *man/parse_10x_sam.Rd
a5561b6210cb6c32a3843c3010dda7e1 *man/seq_correct.Rd
1cdc1cab8291893f8f3f8b5427dd6323 *man/show.Rd
cd28ceefd2264e879135d7bf5a04b7a5 *man/subset.Rd
d41d8cd98f00b204e9800998ecf8427e *src/Makevars
8a8d0e197e34e74255eb32ccb53887c3 *src/Makevars.win
d905c8b37087a5a90f999f14edef8b9f *src/RcppExports.cpp
b3f3486bb393853db62321698c607834 *src/lib_10X_barcode.cpp
7fe819e81ebd0f38b1d2e53f91a75300 *src/lib_clustering.cpp
30b9d2a26844b30c9ab2191d1d147ce4 *src/lib_read_seq.cpp
8e9851a30b4665e883c8c914e767f500 *src/rust/Cargo.lock
bd3f53b29f60fdab7c30804cf0576ec4 *tests/testthat.R
ac731f48138b64eb6a936c43e9232eed *tests/testthat/_snaps/BarcodeObj.md
fe68b46f46b6bd5286586f2a75c54fde *tests/testthat/_snaps/describ.md
4fac3f4ebd49a808410dc999720f68c5 *tests/testthat/_snaps/qc.md
7993a52d28614a13c1e9bdad28604a7e *tests/testthat/test-BarcodeObj.R
fbfe8cf2a480c41231d38508add12ffb *tests/testthat/test-describ.R
ee58e7d1da797ac99a0c70cef25d10c9 *tests/testthat/test-extract.R
9f60b4901681069d3d2cf98e7d3b6ffa *tests/testthat/test-filtering.R
48270dd83305dd9a7f3cb2ae63e7008b *tests/testthat/test-main.R
27e7978351dc5b449247998c172acd8d *tests/testthat/test-qc.R
9a2b0fe02ee09f937e099716ca952e58 *vignettes/Barcode_in_10X_scRNASeq.Rmd
b5687c63488b5e1fad077141fa0c7a83 *vignettes/UMI_VDJ_Barcode.Rmd
