87589d286ae2bc544127f3eee169feaa *DESCRIPTION
cc7b7ffebcb70f67f2225aa84b4a3c4a *NAMESPACE
4077e699d5f077beded7b46f61bcf786 *NEWS
c8da6cc82ea7efa9ae2f517f56ee285a *R/COCOA.R
8a18944c5af9cf3cc0d60c4245399018 *R/data.R
4593b43d13bec2a467fea573bf2d0db4 *R/permutation.R
ab37e9d0adcdc4f9351b88b48f416cb0 *R/utility.R
70d8d85e8945489c1d947138057fcf2e *R/visualization.R
aada0dd6f1c87c16abee320fb79e4aa8 *README.md
6aa44cdc881727fe3c73da5875e9b0a6 *_pkgdown.yaml
32ac7f2cb99d47f19b087bae5b96d10b *build/vignette.rds
da11fe9a46069e4790c41465bf41923e *data/atf3_chr1.RData
37345b88bbd1fd8896bed0f8c08ab077 *data/brcaATACCoord1.RData
bd7c23f7502ae7b1d0667d72b576fed7 *data/brcaATACData1.RData
c53c48111ee41831655af9586b601e63 *data/brcaMCoord1.RData
c7c53181a5381c25c26e9ed00a60a994 *data/brcaMetadata.RData
6f8eb8b678a298a6971b343cf6b3fcda *data/brcaMethylData1.RData
0e6fc8ea3f553db615338cee4715fc0a *data/brcaPCScores.RData
22e786cb6b8b7fe3e7c2453ca5f7c61c *data/brcaPCScores657.RData
fcc6c919c5810adc298fa3fd0e484722 *data/datalist
9725395d9aea5806f5e57a15925fd4bc *data/esr1_chr1.RData
927b1d4ce6ba4de123d828c4544b8e6f *data/gata3_chr1.RData
a174288c7f07dfd4a87a4a9380fe1ab8 *data/nrf1_chr1.RData
d1442a06d82e8f5f02171d38717c92b3 *data/rsScores.RData
d3a1cd6070eb193f84776c2388acd128 *inst/CITATION
f0eca7eb17b5ee75bd444086a9fb7e2c *inst/doc/IntroToCOCOA.R
396fa443bc5c7fa5d9ded63b29793ac6 *inst/doc/IntroToCOCOA.Rmd
adac26d969ac42864ecb41cd48cce66a *inst/doc/IntroToCOCOA.html
676e2aa8ffec97dfbf0303470d66915e *license.txt
5ad14085d003e786ab6de89e78345dc0 *man/COCOA.Rd
7753f18f7d63cfef6218ef61807e8fe1 *man/aggregateSignal.Rd
64b5f6372aaea1d3f0da9745476f2294 *man/aggregateSignalGRList.Rd
8093156719a1a153ebc2c91032f703ec *man/atf3_chr1.Rd
40355dc531e66cb9096efee778bb5ad8 *man/brcaATACCoord1.Rd
6aa8237739f9920018aef1c2a0961db9 *man/brcaATACData1.Rd
2b45e521deef9e407169f075a6f409ff *man/brcaMCoord1.Rd
f58bdd17b54f19a22d506bac3e0b0f70 *man/brcaMetadata.Rd
8438c85d12b2094aaec9471a7b4fbf36 *man/brcaMethylData1.Rd
c8af37f7b0cced32a4adc230e25cea5f *man/brcaPCScores.Rd
ef2cbada96ac2d95257d499705e48878 *man/brcaPCScores657.Rd
129a0deddbe2e8fc9acdd64e8ee63084 *man/convertToFromNullDist.Rd
3190ad0e7384048c2399b90d77f38865 *man/esr1_chr1.Rd
319a4a13ec8027c2c9470f80fa8ef156 *man/gata3_chr1.Rd
0381c0cb294c8c84d19c5e9efc1365df *man/getGammaPVal.Rd
1f92ae977bf7e4a39e1ce1f7fbdba3d9 *man/getMetaRegionProfile.Rd
0e86f86be09390825b5284a792ecde22 *man/getPermStat.Rd
e57da288b22a03184ea2fb2c351d5770 *man/getTopRegions.Rd
8fa634ad4be5a38d126a0292d65a2613 *man/nrf1_chr1.Rd
ad5dba1970d14566a55a98dfa37b6e3a *man/plotAnnoScoreDist.Rd
454f55ad3a4281ab965a523a7becfe33 *man/regionQuantileByTargetVar.Rd
4a6a1226990d2fbe42d0a81a92e0d236 *man/rsRankingIndex.Rd
0bb18124635c5e4d0b58f148c227dadd *man/rsScoreHeatmap.Rd
8ad27404476688b98293260fd74d8f5d *man/rsScores.Rd
f842260460ed56940322d1f9d6b0d199 *man/runCOCOA.Rd
b678a513c65fed977ff326430c3e6d5d *man/runCOCOAPerm.Rd
427dbd1246331f47f171a4be503e1e5f *man/signalAlongAxis.Rd
4b73970207d5fd854086b9100cc23d83 *tests/testthat.R
8ff1a8414b5a0bea753424c37c876914 *tests/testthat/test_all.R
396fa443bc5c7fa5d9ded63b29793ac6 *vignettes/IntroToCOCOA.Rmd
