Changes in version 2.32                         

    o   Allows to download data from Bgee 15.2 with more bulk RNA-Seq
	and single-cell RNA-Seq

    o   Possibility to download h5ad single-cell data with the function
	getCellProcessedData

    o   Possibility to download integrated Bgee gene expression calls
	similar to Bgee gene page results with the function
	getIntegratedCalls

    o   topAnat has been optimized to run faster

    o   The getData function has been deprecated and replaced by the
	function getSampleProcessedData

                       Changes in version 2.18.2                        

    o   Solve issue when downloading all data from one species

                       Changes in version 2.18.1                        

    o   Possibility to retrieve single cell full length RNA-Seq from
	Bgee 15.0 and after

    o   Possibility to filter data based on sex and strain for Bgee
	15.0 and after

    o   Possibility to filter on cellTypeId for single cell full length
	RNA-Seq for Bgee 15.0 and after

    o   Added pValue in the download files

                       Changes in version 2.14.1                        

    o   Solve download timeout with Windows

                       Changes in version 2.14.0                        

    o   Store downloaded data in local SQLite databases

    o   Add filter options to the getData() function

    o   Implement functions to delete local SQLite databases

    o   Update vignette and README

                       Changes in version 2.13.1                        

    o   Fix issue in the getData() function when trying to uncompress
	huge tar.gz files (like all human data or GTeX experiment)

                        Changes in version 2.6.2                        

    o   Fix issue in the formatData() function. It is now possible to
	format using fpkm expression values when using Bgee 14.0.

    o   Implementation of regression tests

    o   Update vignette and README

                        Changes in version 2.6.1                        

    o   Fix issue on Bgee 14.0 tar.gz annotation file management.

    o   Update README and DESCRIPTION files.

                        Changes in version 2.6.0                        

    o   Compatibility with new tar.gz compressed download files.

    o   Better management of potential issues with the ontology
	structure.

    o   Better management of .RData object datasets used to create the
	vignette.

    o   Fixed small issue with species names composed of more than 2
	names (e.g Canis lupus familiaris).

                        Changes in version 2.3.2                        

    o   Compatibility of the TopAnat part of the package with the new
	Bgee release 14 (www.bgee.org/bgee14/).

    o   Better management of potential issues with the ontology
	structure.

                        Changes in version 2.3.1                        

    o   Compatibility with the new Bgee release 14
	(www.bgee.org/bgee14/) only for the processed data download
	part.

    o   The TopAnat part still temporarily uses data from Bgee release
	13.2, until the webservice is ready.

    o   Retro compatibility with Bgee release 13.2
	(www.bgee.org/bgee13/).

                        Changes in version 2.2.0                        

    o   Instead of returning a topGO-compatible object, topAnat.R now
	returns an object from the topAnatData class, an extension of
	topGOdata class from the topGO package.

    o   Fixed small issue with management of data types given as input
	by the user (dataType argument when creating new Bgee class)

    o   Fixed bug in experiment Id check step. Now accomodates SRA Ids.

    o   Fixed data frames header names that included double dots.

    o   Removed dependency to biomaRt in vignette. Code is still
	detailed but not run, instead a pre-created gene list object is
	loaded from the data/ directory.

                 Changes in version 2.0.0 (2016-10-10)                  

    o   Implemented possibility to deal with different Bgee releases.

    o   Improved storage and versioning of cached files.

    o   Implemented use of API key to query our servers in order to
	prevent overloading and spamming.

    o   Improved management of downloading errors.

    o   Harmonized the use of a Bgee class object by all functions of
	the package. For example, loadTopAnatData() now requires an
	input Bgee class object to specify species, dataType and
	pathToData arguments.

    o   Added input Bgee class object to output of loadtopAnatData()
	function.

    o   Created new getAnnotation(), getData() and formatData()
	independent functions to replace the Bgee class methods
	get_annotation(), get_data() and format_data().

    o   In formatData() function, when affymetrix data is used, the
	"stats" parameter is automatically set to "intensities".

    o   Added possibility to reproduce an analysis offline if all data
	files were previously downloaded in cache.

    o   Fixed data frames headers including spaces to more convenient
	headers with spaces replaced by dots.

    o   Harmonized use of camelCase in functions arguments.

    o   Added argument allowing to sort result table in makeTable()
	function.

    o   Implemented management of TPMs as expression unit in future
	Bgee releases.

    o   Updated vignette.

                 Changes in version 1.0.3 (2016-08-31)                  

    o   Update of format_data() function to output an Expression Set
	object.

    o   Fixed makeTable "FDR" column which was a factor instead of a
	numeric.

    o   Fixed get_data() and format_data() functions, which did not
	work when multiple chip types were available for an experiment.

                 Changes in version 1.0.0 (2016-05-03)                  

    o   Public release of BgeeDB Bioconductor package. Enjoy!