ncGTW-package	ncGTW-package
adjustRT	adjustRT
alignData	ncGTWoutput-accessors
alignData,ncGTWoutput-method	ncGTWoutput-accessors
compCV	compCV
downSample	ncGTWinput-accessors
downSample,ncGTWoutput-method	ncGTWinput-accessors
fillPeaksChromPar	fillPeaksChromPar
getPeaksncGTW	getPeaksncGTW
groupInfo	ncGTWinput-accessors
groupInfo,ncGTWinput-method	ncGTWinput-accessors
loadProfile	loadProfile
meanCorOl	meanCorOl
misalignDetect	misalignDetect
ncGTW	ncGTW-package
ncGTWalign	ncGTWalign
ncGTWinput	ncGTWinput-class
ncGTWinput-class	ncGTWinput-class
ncGTWoutput	ncGTWoutput-class
ncGTWoutput-class	ncGTWoutput-class
ncGTWparam	ncGTWparam-class
ncGTWparam-class	ncGTWparam-class
ncGTWpath	ncGTWinput-accessors
ncGTWpath,ncGTWoutput-method	ncGTWinput-accessors
ncGTWpeaks	ncGTWwarp-accessors
ncGTWpeaks,ncGTWwarp-method	ncGTWwarp-accessors
ncGTWwarp	ncGTWwarp-class
ncGTWwarp-class	ncGTWwarp-class
plotGroup	plotGroup
profiles	ncGTWinput-accessors
profiles,ncGTWinput-method	ncGTWinput-accessors
rtncGTW	ncGTWwarp-accessors
rtncGTW,ncGTWwarp-method	ncGTWwarp-accessors
rtRaw	ncGTWinput-accessors
rtRaw,ncGTWinput-method	ncGTWinput-accessors
scanRange	ncGTWinput-accessors
scanRange,ncGTWoutput-method	ncGTWinput-accessors
xcmsExamples	xcmsExamples
