Package: calm
Type: Package
Title: Covariate Assisted Large-scale Multiple testing
Version: 1.23.0
Description: Statistical methods for multiple testing with covariate information. 
    Traditional multiple testing methods only consider a list of test statistics, 
    such as p-values. Our methods incorporate the auxiliary information, 
    such as the lengths of gene coding regions or the minor allele frequencies 
    of SNPs, to improve power.
Authors@R: person("Kun", "Liang", email = "kun.liang@uwaterloo.ca", role = c("aut", "cre"))
License: GPL (>=2)
Encoding: UTF-8
LazyData: false
Imports: mgcv, stats, graphics
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: Bayesian, DifferentialExpression, GeneExpression,
        Regression, Microarray, Sequencing, RNASeq, MultipleComparison,
        Genetics, ImmunoOncology, Metabolomics, Proteomics,
        Transcriptomics
RoxygenNote: 6.1.1
BugReports: https://github.com/k22liang/calm/issues
git_url: https://git.bioconductor.org/packages/calm
git_branch: devel
git_last_commit: 6197cea
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Packaged: 2025-06-04 21:52:50 UTC; biocbuild
Author: Kun Liang [aut, cre]
Maintainer: Kun Liang <kun.liang@uwaterloo.ca>
Built: R 4.5.0; ; 2025-06-05 12:36:01 UTC; windows
