# Generated by roxygen2: do not edit by hand

export(computeCellLine)
export(computeRefTissue)
export(diffExp)
export(loadOctadCounts)
export(octadDrugEnrichment)
export(runsRGES)
export(topLineEval)
import(DESeq2)
import(EDASeq)
import(RUVSeq)
import(edgeR)
import(ggplot2)
import(octad.db)
import(rhdf5)
import(stats)
importFrom(AnnotationHub,query)
importFrom(Biobase,pData)
importFrom(ExperimentHub,ExperimentHub)
importFrom(GSVA,gsva)
importFrom(Rfast,colRanks)
importFrom(S4Vectors,mcols)
importFrom(data.table,dcast.data.table)
importFrom(dplyr,arrange)
importFrom(dplyr,desc)
importFrom(dplyr,everything)
importFrom(dplyr,id)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(foreach,"%do%")
importFrom(foreach,foreach)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(htmlwidgets,saveWidget)
importFrom(limma,barcodeplot)
importFrom(magrittr,"%>%")
importFrom(octad.db,get_ExperimentHub_data)
importFrom(plotly,add_annotations)
importFrom(plotly,as_widget)
importFrom(plotly,ggplotly)
importFrom(plotly,group_by)
importFrom(plotly,layout)
importFrom(reshape2,melt)
importFrom(rhdf5,H5close)
importFrom(rhdf5,h5read)
importFrom(utils,data)
importFrom(utils,globalVariables)
importFrom(utils,head)
importFrom(utils,read.csv)
importFrom(utils,read.csv2)
importFrom(utils,txtProgressBar)
importFrom(utils,write.csv)
