calcThreshold	calcThreshold-methods
calcThreshold,GreyList-method	calcThreshold-methods
ce10.blacklist	ce10.blacklist
ce11.blacklist	ce10.blacklist
countReads	countReads-methods
countReads,GreyList-method	countReads-methods
dm3.blacklist	ce10.blacklist
dm6.blacklist	ce10.blacklist
export,GreyList,character,missing-method	GreyList-class
getKaryotype	getKaryotype-methods
getKaryotype,GreyList-method	getKaryotype-methods
grch37.blacklist	ce10.blacklist
grch38.blacklist	ce10.blacklist
GreyList	GreyList-class
greyList	greyList
GreyList-class	GreyList-class
greyListBS	greyListBS
hg19.blacklist	ce10.blacklist
hg38.blacklist	ce10.blacklist
initialize,GreyList,BSgenome-method	GreyList-class
loadKaryotype	loadKaryotype-methods
loadKaryotype,GreyList-method	loadKaryotype-methods
makeGreyList	makeGreyList-methods
makeGreyList,GreyList-method	makeGreyList-methods
mm10.blacklist	ce10.blacklist
mm9.blacklist	ce10.blacklist
setRegions	setRegions-methods
setRegions,GreyList-method	setRegions-methods
show,GreyList-method	GreyList-class
