# Generated by roxygen2: do not edit by hand

export(df_to_fasta)
export(fcs_plot)
export(fcs_processing)
export(igblast)
export(quality_report)
export(summarise_abi_file)
export(summarise_quality)
import(Biostrings, except=c(collapse, union, intersect, setdiff, setequal, compareStrings))
import(basilisk)
import(basilisk.utils)
import(dplyr)
import(flowCore, except=c(filter, cytolib_LdFlags))
import(ggplot2)
import(here)
import(knitr)
import(reticulate)
importFrom(Biostrings,BStringSet)
importFrom(Biostrings,writeXStringSet)
importFrom(DECIPHER,AlignSeqs)
importFrom(DECIPHER,ConsensusSequence)
importFrom(data.table,rbindlist)
importFrom(gridExtra,grid.arrange)
importFrom(kableExtra,kable)
importFrom(kableExtra,kable_styling)
importFrom(methods,is)
importFrom(parallel,detectCores)
importFrom(parallel,mclapply)
importFrom(plyr,mapvalues)
importFrom(pwalign,compareStrings)
importFrom(rlang,.data)
importFrom(rmarkdown,render)
importFrom(sangerseqR,chromatogram)
importFrom(sangerseqR,makeBaseCalls)
importFrom(sangerseqR,primarySeq)
importFrom(sangerseqR,read.abif)
importFrom(sangerseqR,readsangerseq)
importFrom(sangerseqR,sangerseq)
importFrom(sangerseqR,secondarySeq)
importFrom(scales,math_format)
importFrom(scales,trans_breaks)
importFrom(scales,trans_format)
importFrom(stats,na.omit)
importFrom(stringr,str_detect)
importFrom(stringr,str_locate_all)
importFrom(tibble,rownames_to_column)
importFrom(utils,read.table)
