export_dt               Export the mutation matrix
filter_loc              Filter mutations
format.mtmutObj         Print mtmutObj object
get_pval                Get p-value list for single locus
open_h5_file            Open H5 file
parse_mgatk             Load mtGATK output
parse_table             Load allele count table
plot_af_coverage        QC plot: 2D scatter plot for coverage ~ AF
plot_heatmap            Heatmap plot
process_locus_bmbb      Fit tree models for one locus
rm_mtmutObj             Remove mtmutObj object
run_model_fit           Fit binomial mixture model for every candidate
                        locus
scMitoMut               scMitoMut
subset_cell             Subset cell and loci
