CHANGES IN VERSION 1.39.1 ------------------------- o Add `extractByIndex()` generic. CHANGES IN VERSION 1.37.1 ------------------------- o Add `estimatePrecursorIntensity()` generic. CHANGES IN VERSION 1.35.4 ------------------------- o Move `backendParallelFactor` and `backendBpparam` and `supportsSetBackend` generics from `Spectra`. CHANGES IN VERSION 1.35.3 ------------------------- o Move `backendInitialize`, `backendMerge`, `setBackend`, `isReadOnly`, `peaksData`, `peaksData<-` and `peaksVariables`, `filterRanges`, `filterValues`, `filterPrecursorMzRange`, `filterPrecursorMzValues`, `filterProductMzRange`, `filterProductMzValues` generics from the Spectra package. CHANGES IN VERSION 1.35.2 ------------------------- o Add `filterSpectra` generic. CHANGES IN VERSION 1.35.1 ------------------------- o Add `filterFeatures` generic. CHANGES IN VERSION 1.33.1 ------------------------- o Rename uniqueMsLevel() to uniqueMsLevels() CHANGES IN VERSION 1.29.1 ------------------------- o Add spectrapply generic CHANGES IN VERSION 1.27.2 ------------------------- o Add addProcessing generic <2022-01-04 Tue> CHANGES IN VERSION 1.27.1 ------------------------- o Add new adjacencyMatrix generic <2021-12-11 Sat> CHANGES IN VERSION 1.27.0 ------------------------- o New Bioc devel version CHANGES IN VERSION 1.25.1 ------------------------- o add bin, compareChromatograms and compareSpectra CHANGES IN VERSION 1.25.0 ------------------------- o Bioc devel (3.14) version bump CHANGES IN VERSION 1.23.9 ------------------------- o Added new uniqueMsLevel generic <2021-04-08 Thu> CHANGES IN VERSION 1.23.8 ------------------------- o Added new filterPrecursorCharge generic <2021-04-06 Tue> CHANGES IN VERSION 1.23.7 ------------------------- o Add ProcessingStep object and related methods (moved from Spectra) CHANGES IN VERSION 1.23.6 ------------------------- o Added quantify generics (moved from MSnbase) <2021-01-02 Sat> CHANGES IN VERSION 1.23.5 ------------------------- o new alignRt generic. CHANGES IN VERSION 1.23.4 ------------------------- o new virtual Param class. CHANGES IN VERSION 1.23.3 ------------------------- o new filterIntensity generic. CHANGES IN VERSION 1.23.2 ------------------------- o new compounds generic. CHANGES IN VERSION 1.23.1 ------------------------- o new calculateFragments generic (moved from MSnbase) CHANGES IN VERSION 1.19.3 ------------------------- o new impute generic CHANGES IN VERSION 1.19.2 ------------------------- o new filterNA generic CHANGES IN VERSION 1.19.1 ------------------------- o new aggregateFeatures generic CHANGES IN VERSION 1.17.4 ------------------------- o New generics needed in Spectra and Chromatograms packages <2019-08-20 Tue> CHANGES IN VERSION 1.17.3 ------------------------- o New tolerance generic <2019-08-16 Fri> CHANGES IN VERSION 1.17.2 ------------------------- o New generics (see issue #8) <2019-05-12 Sun> CHANGES IN VERSION 1.17.1 ------------------------- o Move many generics from MSnbase <2019-05-11 Sat> CHANGES IN VERSION 1.9.1 ------------------------ o add writeMSData <2017-09-20 Wed> CHANGES IN VERSION 1.5.1 ------------------------ o added isCentroided generic <2016-07-23 Sat> CHANGES IN VERSION 1.5.0 ------------------------ o Version bump Bioc devel CHANGES IN VERSION 1.4.0 ------------------------ o Version bump Bioc 3.3 CHANGES IN VERSION 1.3.3 ------------------------ o exporting mz<- generic <2015-10-19 Mon> CHANGES IN VERSION 1.3.2 ------------------------ o Not depending on BiocGenerics <2015-10-16 Fri> CHANGES IN VERSION 1.3.1 ------------------------ o added chomatogram generic (previously defined in MSnbase) <2015-10-15 Thu> CHANGES IN VERSION 1.3.0 ------------------------ o Bioc release 3.3 CHANGES IN VERSION 1.2.0 ------------------------ o Bioc release 3.2 CHANGES IN VERSION 1.1.1 ------------------------ o new mz<- generic function <2015-10-01 Thu> CHANGES IN VERSION 1.1.0 ------------------------ o Bioc devel version 3.2 CHANGES IN VERSION 1.0.0 ------------------------ o Bioc release version 3.1 CHANGES IN VERSION 0.99.3 ------------------------- o update man with when and why ProtGenerics [2015-03-16 Mon] CHANGES IN VERSION 0.99.2 ------------------------- o updating DESCRIPTION as with BiocContributions::clean [2015-03-03 Tue] CHANGES IN VERSION 0.99.1 ------------------------- o Adding NEWS file [2015-02-27 Fri] CHANGES IN VERSION 0.99.0 ------------------------- o adding ProtGenerics to Manifest