5b9d9ca792e28b6e06b2f547368780b7 *DESCRIPTION
11684e1764243cdd11bd614df6791a41 *NAMESPACE
0e125e09c16bbdc77e5224cdae163a9f *R/XenSPEP-class.R
b517fa90c7284de9dee022a84b338757 *R/XenSPEP-constructor.R
6f9153397ddd0226c3c102e38badd229 *R/cache_mtif.R
971a3d6d54c833a665888dc45fa78e8f *R/data.R
e38ad05223c028f84f2716a85788733f *R/e2sym.R
1c717883be9d10ebcacbb38198fbde78 *R/ebapp.R
924744c03dbbfc3e68cba4f5f3364cad *R/ggcode.R
3019b7d26385f68f1cd073bb5ce3b4e5 *R/ingest_xen.R
585a2db09111c5308e72775a41bd4e97 *R/loadGeometry-XenSPEP.R
8f50d76c18c6dff39c946aa3eed70987 *R/plotCellBoundaries.R
80b016361b7acd6cfa211e668d4046be *R/reset_parq_paths.R
7fc40e30d6db74b273c93587e0483ba8 *R/view_seg.R
5b4d07cc6ae19176a035fb46313054d6 *R/view_seg_g.R
cc0bf263a9370cd6eedd18891908ecdd *R/zipXenSPEP.R
497e091f9cf1f5d8cdf3708fc462f5f6 *README.md
d55b9f6a2b0c8d90f981a9b1172bada2 *build/vignette.rds
b5182887cd0b0a956796fd4d65ebee63 *data/e79sym.rda
34cea777e7af17a7f250fe4cb624b48b *inst/app_mel/server.R
371036fbd2f0084c006e073213731ef6 *inst/app_mel/ui.R
058d381a6071d375e9c51c894518dd72 *inst/doc/xenLite.R
4c224dcc3c6f87538d49afcd4653b9f5 *inst/doc/xenLite.Rmd
35067c1a5281259527ac43e1b53beaaa *inst/doc/xenLite.html
ca0f6171359dd6546c721b86301e93ef *inst/oldR/XenSCE_class.R
c33beb4731040be2c49835637805c25b *inst/oldR/build_demo.R
ce4596d2e96523850b04d5ffb717050f *inst/oldR/build_panc_subset.R
a64f1cf94f4b6f1a7046806e1a392527 *inst/oldR/cache_assets.R
b7ddca39a417c1d68e29d6842970c28a *inst/oldR/hdf5_dep.R
f9d762b88d086638c8ad6e6305932550 *inst/oldR/hdf5prost.R
d7d46f627e1d58639b9c231ac07e3227 *inst/oldR/plotCellBoundaries.R
98173ebeda8d2a22dd34c55286fd20d0 *inst/oldR/sfe2xsce.R
56cca6b88eda55d2588a31b0f3b56453 *man/XenSPEP-class.Rd
0b863a650a3f6fd7fc1dbb3ee041a45c *man/XenSPEP.Rd
e9778d13f4b96b2c54da1ca1ef02de4f *man/cacheMtif.Rd
1ee771799967c425641870b7d67db0c7 *man/cacheSfeLungNtx.Rd
572ddc6fbfa8bb560208d7c0cc4b5198 *man/cacheXenLuad.Rd
f1f461acc77850f72d472ff3938a6611 *man/cacheXenPdmelLite.Rd
74940e1b10e5090f6b6be448d6dd1d61 *man/cacheXenProstLite.Rd
c61ef93e2772a50ec7216e3814f760c8 *man/clipRect.Rd
c58c5d722e9fc8f6149380fd7a701232 *man/demoapp.Rd
2d9951e96bb21c99a9c85865f2c6fddf *man/e2sym.Rd
5ee3459c1997886eb09343e2913cdf05 *man/e79sym.Rd
5ceac06a6853cf5522696c7c1e3c2707 *man/figures/napp2.png
2ee0afc741b34b31a300bfa9060c5540 *man/figures/nappcd.png
fe0b828e0ac33c9c410e551217d83fd5 *man/figures/nappma2.png
cc58b60a9d187a659966358005293eb6 *man/getCellBoundaries-XenSPEP-method.Rd
c26dd81556a898fd0bb26debd9876436 *man/getCellBoundaries.Rd
797c86f2903f83e2a230f0971de8c605 *man/getNucleusBoundaries-XenSPEP-method.Rd
33db85ebdf72bb3a7dcf48a4de5a0fb3 *man/getNucleusBoundaries.Rd
b6d2818ec74321d5564e22abfde8c13f *man/getTranscripts-XenSPEP-method.Rd
5c010c21c87c866671d2f624684770e7 *man/getTranscripts.Rd
6fa6dc0215de261031a17e414330e8b6 *man/ggprepSeg.Rd
8fcf421abbbffc271099cdecc83297d4 *man/ingest_xen.Rd
f3c83f38f9044b91e4dacd0136ce579a *man/loadGeometry-XenSPEP-method.Rd
72103a22d321794a88f37a7a01603aeb *man/loadGeometry.Rd
bdb04b14ab3e877edd3b1c395a8bef26 *man/plotXenGgprep.Rd
8fa922c1f053b07a8e0c2023d7435696 *man/printXenGgprep.Rd
65f5793a7235412f55908bb893d03316 *man/resetParqPaths.Rd
d39974d19f3bf15606fe1f19dd731fcd *man/restoreZipXenSPEP.Rd
04b5867b6f29b977829d90e386c6e34d *man/show-XenSPEP-method.Rd
0f14dfb7fdaef57a1f0502aa4818578d *man/sub-XenSPEP-ANY-ANY-ANY-method.Rd
ab2a4989ee5bd4b402aa0f5c7dc4eed9 *man/viewSeg.Rd
436543a7ca14b4e6d1798e34da35e7b6 *man/viewSegG2.Rd
84401a68e56a39e25b3b673fa0db15ee *man/zipXenSPEP.Rd
ac1f4a7319401c178c228bbb70ce99b0 *tests/testthat.R
54e33c4d4241ece53476c98d51d4ead2 *tests/testthat/test_xen_luad.R
8d913955cb1b9926b23298f55cea3faa *vignettes/FBLsketch.png
d594591f3106f9b2934b60e3d4e7da13 *vignettes/fblmap.png
4c224dcc3c6f87538d49afcd4653b9f5 *vignettes/xenLite.Rmd
