# Generated by roxygen2: do not edit by hand

export(HDF5NAdrop2matrix)
export(poolData)
export(regionSummary)
export(tpEstimate)
export(tpPlot)
export(vmrseqFit)
export(vmrseqOptimControl)
export(vmrseqSmooth)
import(GenomicRanges)
import(SummarizedExperiment)
import(ggplot2)
importFrom(BiocParallel,MulticoreParam)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(BiocParallel,register)
importFrom(DelayedArray,colMeans)
importFrom(DelayedArray,colSums)
importFrom(DelayedArray,is_sparse)
importFrom(DelayedArray,rowMeans)
importFrom(DelayedArray,rowSums)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,granges)
importFrom(HDF5Array,saveHDF5SummarizedExperiment)
importFrom(IRanges,IRanges)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,queryHits)
importFrom(S4Vectors,subjectHits)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(bumphunter,clusterMaker)
importFrom(bumphunter,getSegments)
importFrom(data.table,fread)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,lag)
importFrom(dplyr,mutate)
importFrom(dplyr,right_join)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(gamlss.dist,dBB)
importFrom(gamlss.dist,dZIBB)
importFrom(gamlss.dist,rBE)
importFrom(gamlss.dist,rBEZI)
importFrom(locfit,locfit)
importFrom(locfit,lp)
importFrom(methods,new)
importFrom(recommenderlab,dropNA)
importFrom(recommenderlab,dropNA2matrix)
importFrom(stats,fitted)
importFrom(stats,loess)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,var)
importFrom(tidyr,pivot_longer)
