e2a8f04e645c9e15458aa485910e1244 *DESCRIPTION
b399c7345046f5cebeab09eb019fe61f *NAMESPACE
d9a5fe04afa510936d68e1b00ce4cf67 *NEWS.md
57263918fb56a6f7a73e36079ebdc1b4 *R/SuperSig-class.R
d8b7c51ea24d189eecadc71d2a1e5665 *R/all_my_auc.R
42d75b3a232d74e9bd4ecc03d451cf29 *R/condense_mutations.R
fbe7a896d2b4d3c9a01524fea6627881 *R/context_matters.R
0105efe315727c46d47114ac84dc8ad1 *R/convert_to_level3.R
5e97fca619e4e335d32825e5820e2816 *R/example_dt.R
6cef26e77313997bc0e95f6d12c384e1 *R/feature_selection.R
14e4bb541975f3c23b05850c9f874f80 *R/generate_min_sigma_algebra.R
6fe2c1a04bd485e151a7bab2eae4fc71 *R/get_signature.R
48bc1c8b67afcb3d6dd7ddfe6db1296e *R/globals.R
f1dfe93160b67df3e9838dbf5d5270a9 *R/make_matrix.R
da326682bf432b977bd162ff80c796ad *R/my_auc.R
9fc6b2eea37445dbad3c26545b0aa8f6 *R/partial_signature.R
e2e90ff62f54ff68ee79fb451f0a5812 *R/predict_signature.R
0b3ef7bda82d0a84fe1ca3460bbd502b *R/process_vcf.R
ad2cc8b5972c0acc5cb72841bebed4f2 *R/simplify_signature.R
efc9ef09e0d277c55e65609585118f07 *R/supersig_classifier.R
b8a350b10cd795f029c8fcb0bdadef84 *R/supersig_ls.R
fcffe2cc8c514893d42bce56c98f61ae *R/sysdata.rda
e9dfc9d4cdf427b0b5aa7b3352ee70f8 *R/transform_data.R
ae268fea49e5b4be57dfd6d746a45795 *README.md
da36034793f8e402f57fe463d8c1d94b *build/vignette.rds
a860a2076766e437107e6ed979139ec6 *data/example_dt.rda
fc11e7d01716d86b5fae0c74adaa604d *data/supersig_ls.rda
b7ced4b0b172d3dbdca4edb0ab6f9090 *inst/doc/supersigs.R
e8d6ef72962ae3cb52d711e9a0005a57 *inst/doc/supersigs.Rmd
bd392cd0fe64d38abb4a6d217f1ee2a1 *inst/doc/supersigs.html
f4f9e04e1e8298c050767537b67d0786 *man/SuperSig-class.Rd
93bb0f8dc380ca93ba7a1f16becb8d07 *man/example_dt.Rd
6daaedb6573cc225abe9503475a31bbc *man/get_signature.Rd
7bb8fc0fea8fb51e6a962b9bb9ea1b1d *man/make_matrix.Rd
513e767f0c30ab0a237192d597ce885f *man/partial_signature.Rd
c7d4245db5a36527c0c648c63406f6bb *man/predict_signature.Rd
f3151f0b0f5a43c5592fac6db6bf9a66 *man/process_vcf.Rd
a5171e66bdd1b0fc284f45b19bc05b87 *man/simplify_signature.Rd
5c14e1c1642e5fb68465138a80f3caae *man/supersig_ls.Rd
d83399c9f773864aa886dd385f6cc6ac *tests/testthat.R
0d890b9f45ff58327dd968673122bdeb *tests/testthat/test_auc.R
1f4ca79e717ceb493a2e61f954224bc7 *tests/testthat/test_context_matters.R
24394da32d07fc0ad41bcdb78fd7ad97 *tests/testthat/test_convert_mutations.R
aaffe4e6334a6a0535f198ae22713458 *tests/testthat/test_get_signature.R
54110a3e0a0d12483f5bd5b9511cd6ce *tests/testthat/test_gmsa.R
303e5b2e1c47715bf41c129f1310010e *tests/testthat/test_make_matrix.R
e8d6ef72962ae3cb52d711e9a0005a57 *vignettes/supersigs.Rmd
