85cf02be23005037846e05433d1b45c3 *DESCRIPTION
07e0260acf69b3a136253e4e7be6c2ae *NAMESPACE
49506088807d4cf398ae91ea688db303 *R/RcppExports.R
9f9847aa632b2dce7b2e500e74af6db8 *R/Run_Clustering.R
8d7b01b1efaa1aa78155b3bc79121b3a *R/Run_Create_Obj.R
0136cf043957392a232fc8ceb77f81e0 *R/Run_HTML.R
d83a620aa07cb677282a4ebeeb4e1f3c *R/Run_Interactive.R
3bf2f595818f56ae9e1ba24d93650d0b *R/Run_Loc_Match.R
6aed48f4b2a95aefd826040d5e2565f1 *R/Run_QC.R
b6c4de46144989833c7bbae431e6691b *R/Run_ST.R
1c3b56b9e2930cd536122862074cb092 *R/Run_Visualization.R
bf9b36b91c4a9c56562ae401d6afb53f *R/basilisk.R
af8c10102b34def11fb5ca97b2f536cd *R/catch-routine-registration.R
63d44aff93986ad38c2b9cebd752d6c0 *R/data.R
560b0342cbfca84b3ab853f5a6975caa *R/help.R
79e308a7eb4882aa771f5eea0a32b8da *README.md
cecb027ddea1e603e5c07436c6db47eb *build/vignette.rds
c4e1443f24d066568dc9e40a06758899 *inst/NEWS.Rd
38387527a40cbcb6ecba97e58dc6cea2 *inst/config/config_stPipe.yml
229be330d948802d31b3abe9f1d5672b *inst/doc/stPipe-vignette.R
b2e7b1b09656487e5c0ae457fedc24ed *inst/doc/stPipe-vignette.Rmd
d3a00924299e0b906b3507c06a2167dd *inst/doc/stPipe-vignette.html
d87b8026f0d752f9fbdbb01d16c716bc *inst/extdata/Visium_Human_Transcriptome_Probe_Set_v1_0_GRCh38_2020_A.rds
83548e733bb9b62419a949920150c9c1 *inst/extdata/Visium_Human_Transcriptome_Probe_Set_v2_0_GRCh38_2020_A.rds
ee01b86a1f5924d2bb488e4e37253b39 *inst/extdata/Visium_Mouse_Transcriptome_Probe_Set_v1_0_mm10_2020_A.rds
66027e8b87c37dc36870410d98dc9edd *inst/extdata/demo_R1.fq.gz
88cb916287debcb79f07ff0c5ba1606c *inst/extdata/demo_R2.fq.gz
7345e5f3887a88ecc9bd1c1efd402296 *inst/extdata/ref_pos.csv
a18f860d1edd71cc8faeaff9230da8f7 *inst/extdata/tissue_hires_image.png
6bf2d741daa4225b792bfb25c3d4d4c1 *inst/extdata/visium_v1_coordinates.rds
6bf2d741daa4225b792bfb25c3d4d4c1 *inst/extdata/visium_v2_coordinates.rds
35e6cce484480e68bdb956b19301e385 *inst/extdata/visium_v3_coordinates.rds
35e6cce484480e68bdb956b19301e385 *inst/extdata/visium_v4_coordinates.rds
18446849f466a791aeaeaff118cd0815 *inst/extdata/visium_v5_coordinates.rds
6d4497ff4a6b7f7f0f920b0d545cb35e *inst/python/Visium_pixel.py
863dd96632be0ae20ab71ae8e8823f6d *inst/rmarkdown/templates/stpipe-report/skeleton/stPipe_Report_Skeleton.Rmd
6b863a5c20d750b071c4a37af9306ed9 *inst/rmarkdown/templates/stpipe-report/template.yaml
ec51eacc5c9f6c562fc6f23f5a6b8cc8 *man/Run_Clustering.Rd
94656f3c3859e52e3a638684eb54145b *man/Run_Create_Obj.Rd
bb3198ed30559a2eca218c2c44fca23e *man/Run_HTML.Rd
cd9fb170ed0615a8e50b3f29baafc556 *man/Run_Interactive.Rd
1c80965af2313ae47fa2e8b644060b86 *man/Run_Loc_Match.Rd
f43cf8d0e4649010251a04086f823848 *man/Run_QC.Rd
c10e79c234460f6a5806bf55a8613090 *man/Run_ST.Rd
0682ac33d55b27f170df10e446fe1694 *man/Run_Visualization.Rd
16cca8a15f4b98e651d327bc220f313b *man/stPipe.Rd
f4daeec6e7136c011cbd91566dfd9b2f *src/Makevars
3a3358476258c3c9ee788bd1273e6dda *src/RcppExports.cpp
f6986d5d8c3e8d5ec08aae952db624f9 *src/st_demul.cpp
3332a4affe5b211b37b65a3d3311d9ba *src/test-example.cpp
c2cb0c30e10da611f9fbe56aea52f7a9 *src/test-runner.cpp
337e5fbdcb7113ec9f069b6282023213 *tests/testthat.R
8aa1ffd1d418e73269d3040984aaf5fe *tests/testthat/test-cpp.R
3dfc415cdc4d7562f71e1e82311f05ee *tests/testthat/test_Run_Clustering.R
b5636e6a4519b88baa407b461fcdf181 *tests/testthat/test_Run_Create_Obj.R
a98e86ff861174d9d816f8674cd49f6e *tests/testthat/test_Run_Loc_Match.R
1a7c2f364830ede4c712ab7d4dd0969e *tests/testthat/test_Run_QC.R
0fce2a2532134eec02944965f6804a66 *tests/testthat/test_Run_ST.R
50f2a5cd735f3705f50bea84a0f5aa12 *tests/testthat/test_Run_Visualization.R
b2e7b1b09656487e5c0ae457fedc24ed *vignettes/stPipe-vignette.Rmd
cc157806b71cdd5206289a937fd46cf2 *vignettes/stPipe_logo.png
