b31b5bb6b79b0f7a9fdc600338b2f0f4 *DESCRIPTION
5c4f7efdc699acaf97e28a7f39997155 *NAMESPACE
b4755c10eb4349e1b13e996398679218 *NEWS.md
a1999c48dae05cbc389e85c9be8b8405 *R/AllClasses.R
acf6655db3e16762295fb15969f68400 *R/AllGenerics.R
b806f940be582267f04b7996f9ef0734 *R/RcppExports.R
0542ce4caefa18377070682428883500 *R/aa-global.R
ee2daf5e3aeb383fa553622cbc172c9a *R/accessor.R
0e88a4fb0df732025bbd4c69f203bb8d *R/build_custom_db.R
01bee66eed5d2998e57a0b8458624848 *R/comp_fea_res.R
d4b5f85c5fa485929f6ceb0ed30f55cf *R/dsea_GSEA.R
ab126d63222187c495aa22fda2746757 *R/dsea_hyperG.R
68fa31b47492abefcafc605d7059c5b7 *R/dtnetplot.R
052b607ffdc2b4b14d0ba013580f0945 *R/feaResult-methods.R
0dd8137af87914d002de808bb15381ca *R/fgsea2.R
6409e1b318b4bdba71d2148fc70466c5 *R/gessResult-methods.R
4ae46227831b0ace4d7a2b204398c078 *R/gess_cmap.R
ae8b5c7da3cdf6c7d5ed285faaf6f153 *R/gess_cor.R
bcbca5023abfbe6e34203bb1a8c5365d *R/gess_fisher.R
6808e916ee4d383f2e3e22728fb01d98 *R/gess_gcmap.R
109ec87893008adbec15c9684cc5abee *R/gess_lincs.R
ad888874f3be4674e0ad9b1401125657 *R/gess_res_summary.R
d983abfdd51a0ea26a95b53b6e0b6753 *R/get_functional_catgory_data.R
0e6f58633a967c9398a3b5f9673b2daf *R/get_targets.R
2aa217119cce956f9320b3d1702b8807 *R/gseAnalyzer2.R
ae3e665d89f2a2c29eedf630b280b914 *R/gsea_internal.R
af99aa220cfe0e8c01a039e0d0110d5f *R/gsea_internal2.R
63bb2669344e0d95e6eae644114e338e *R/io.R
7a754887f66dff9414cffd155ea34d2f *R/mabsAnalyser.R
5b40831639d48c74bbaef5bdb77e6a57 *R/mabs_internal.R
7c4f56efd9837ee000aabfa8bfeb4968 *R/moa_conn.R
4adfe2bfeffbb12f84217122a1ffaa29 *R/oraAnalyzer.R
20627eeadbbcb81370c18d437bafb0d3 *R/ora_internal.R
d65cbb0bfc51d79ff1e5ad3cab789836 *R/qSig-methods.R
7738fac957bc16af6c99829d430a8931 *R/refdb_treat_info.R
9e4cdb99818121bd069585f28a26d314 *R/runWF.R
895c07560b116c0e2532dc2b458fb23b *R/signatureSearch-package.r
b9974a1a1f98570d35b520c397dc856f *R/sysdata.rda
3f5fbb843b825f5fd3012eaab64c161d *R/tsea_dup_hyperG.R
7d457dee1be986cff03cb7456e49ac02 *R/tsea_mGSEA.R
fa1d6b38d38982a995b60aae78ee1a0b *R/tsea_mabs.R
695e5f11e7131ee674120dd57e72355f *R/utilities.R
2e5edc1cf06017812e5bb78ebc1c526e *README.md
a5fb48f885e2742b378eeabba821016e *build/vignette.rds
21df6739491e12ce811766935a55c309 *data/cell_info.rda
c8ca284bb3d3697cbef796cedb24eabc *data/cell_info2.rda
c9667124087179fb6dd1edb03d914d90 *data/chembl_moa_list.rda
1312287cec829f84a474f368dd747b74 *data/clue_moa_list.rda
026646638a3139f9303f9bf9026d315c *data/datalist
ded9df7261042bc403c91aefcbcd82f2 *data/drugs10.rda
f553ac7041d9c7e88fe3c4b97759c074 *data/lincs_expr_inst_info.rda
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d680e2e30318ecbbe3315e26bfbfe40e *data/lincs_sig_info.rda
ceda5878b62cd9eb95ce5c50d234b5da *data/targetList.rda
2734d2bf46a7db9e5a83ec6a070f1d82 *inst/CITATION
7e3d4719f56f203c9119a214b2bf8b28 *inst/doc/signatureSearch.R
85cfa97704eed55c182d4e265f13f195 *inst/doc/signatureSearch.Rmd
c930aa5423f0cd4709a0f2a774288d83 *inst/doc/signatureSearch.html
56078ec3f9b3a04b1e696d2b88dbeb89 *inst/extdata/GESS_FEA_report.Rmd
9d3fa5723ae431328669c5929528784a *inst/extdata/GESS_report.Rmd
fc1ab1bd3121d4e7e02eec0127e3254e *inst/extdata/LINCSGeneSpaceSub.txt
a324915976ab8c1113ad15d02c8df757 *inst/extdata/sample_db.h5
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d26bc1c1c7aaa0754505e16fc4765bdc *inst/extdata/test_gene_sets_n4.gmt
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8092a42ba740f2dbd9edfd0779c57d18 *man/addGESSannot.Rd
eeee879c6031ef0dbb157ade31a78f1d *man/addMOA.Rd
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ad7e1816fda36090df9c428c021955b4 *man/comp_fea_res.Rd
511865f1be7deb50a563f412abeffc1c *man/create_empty_h5.Rd
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a4bbb32e6fe91b52f9d3b04b7f38a3d3 *man/drugs10.Rd
7b051d9798dbff52fda6b022cf224c7d *man/dtnetplot.Rd
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1fcb9bca4ea3bcd4fb618ea98510c978 *man/enrichKEGG2.Rd
4380ccd8447903be99aeac2dbbbd7833 *man/enrichMOA.Rd
fb79a60cadbb03ab188d40204b8dd9af *man/enrichReactome.Rd
2727cabd4dd173659e81ed930ef8a1dc *man/fea.Rd
26eb4ff4504033674cabcc392ffbc8ae *man/feaResult-class.Rd
dd531dc7aac24b3ffc1bda7e5b296cf3 *man/feaResult.Rd
e882d4946952e4d04b5b9c731ad3c0b6 *man/gctx2h5.Rd
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acde0acb12dc013756c97adc9610d37f *man/gessResult-class.Rd
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cb5320a98cd3ffbce36a90ebc8deb72e *man/gess_res_vis.Rd
66cee8040a1f8aa983f5d9e3c71a3440 *man/getALLEG.Rd
6e1485d698df0454c956eb978289bd52 *man/getDb.Rd
374e3b9cb9e3b2d4717717a6789a8988 *man/getSig.Rd
5c7a17d170e543a197fc99138eea4f7b *man/getTreats.Rd
37611d558e1fc307fc63229e2935b2c5 *man/get_targets.Rd
6c9eef8d05a9e0335f1cd561fc5c0d57 *man/gmt2h5.Rd
a4ac9c37cff41e2ad5944301f39954b0 *man/gseGO2.Rd
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3f4b77bc67ff8e777237bc379677b278 *man/gseReactome.Rd
c03dad4644fad70b6d506d88610f9b46 *man/head-methods.Rd
6759e6d4ff84766934ee4f6a029a2993 *man/lincs_expr_inst_info.Rd
588887100f4bb52c0492f86bd14ef3ca *man/lincs_pert_info.Rd
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c36204723575646f9308107d29a2baf4 *man/moa_conn.Rd
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1a0acafaf504b3fd9b073d84e3d10ee4 *man/runWF.Rd
a5f2db60238e2bbb08592dd7de0692d8 *man/set_readable.Rd
b21c77a0fdbff9058b1e6f0930f86fcd *man/show-methods.Rd
9b44777c1dd2dc3d02bcaad354442b76 *man/signatureSearch-package.Rd
5f494afa651c05bc453018e1da2fc136 *man/sim_score_grp.Rd
120c8e248f9b124a725e0247fdfdca7e *man/tail-methods.Rd
83ad15f4a5a6ec8129ec06596de7b20d *man/tarReduce.Rd
d6cd25614bfbad0adfcf20085271df4f *man/targetList.Rd
ff89a814c72f1dbf6259ae470beb38bd *man/vec_char_redu.Rd
dd80ec7af491be3941cbf56933c91ee8 *src/RcppExports.cpp
1258624d70fb66d73ab2ad26ab5e0caf *src/fastGSEA.cpp
97a6971621067e9919daa36a1d88c51a *src/fastGSEA.h
3ff59335d41aef998fcb04bd7e000123 *src/fgsea_init.c
30a266025e80af6eb83a6e69b437546a *tests/testthat.R
4e6d8b1ec1df60ca632a4290467cc078 *vignettes/bibtex.bib
eb7dec6f3403b0e9d4c5efd99ff22a9a *vignettes/images/lincs_cell_ntest.png
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85cfa97704eed55c182d4e265f13f195 *vignettes/signatureSearch.Rmd
