aec0b4a6315528a89bc65e34ded72cbb *DESCRIPTION
827c762a4a4125bcddb9013c558c53e2 *NAMESPACE
e04b6b47a908cf993cf1572d5016bdef *R/AllClasses.R
7ab39a2129659e1c1474ddc508a660f5 *R/AllGenerics.R
58aa9cd018d58f0c158ab3bedfa7bf36 *R/SCESet-methods.R
a92909efc760c2b1ef00eb3c5a0dab2a *R/SingleCellExperiment-methods.R
adba1250732ea2a0e46469181f7e0de8 *R/annotateBMFeatures.R
1561916192f0fae7861b80bfa4d5307a *R/defunct.R
4a95b4b721294dad96639938d30aa070 *R/getExplanatoryPCs.R
01f6d6aa3f71835d29346d1d225d7dcb *R/getVarianceExplained.R
167c18876bfa8a776744dbceaf88a473 *R/ggsce.R
a4b30204b65348ed93e947358b2bcff6 *R/nexprs.R
c0a3f9e2734ed6a99aa0e188274ee7ef *R/plotColData.R
13a78f5e2bac9760ec7a5bc214b10697 *R/plotDots.R
9b50939c273f8855369abc0425616f4e *R/plotExplanatoryPCs.R
c8f07cd072a79db7e98fd9e2d051d95b *R/plotExplanatoryVariables.R
9aaa9177987fa21d68312ff6d41cdaa1 *R/plotExpression.R
f3f9f2902bd3eea7f49b500d5451fda4 *R/plotGroupedHeatmap.R
551235588f6c1650887c44bd13fc7fcf *R/plotHeatmap.R
ce684080f0d4f91537b7a9324044a3f3 *R/plotHighestExprs.R
2b01f1ac8162f0963064de42e39a33c3 *R/plotPlatePosition.R
1440c626c546fe29a1834052a6367964 *R/plotRLE.R
6623b9c75e8ce4977deec7009101f6ee *R/plotReducedDim.R
19ad18ecafd154cbfaa37672c97e1fd6 *R/plotRowData.R
37f1d319e122f350329ff16a735c5bce *R/plotScater.R
b7fab22d7ffb9b46fc32c13dff062a6d *R/plot_central.R
f7fe3127c2140ca11cea49c5f12140a4 *R/plot_colours.R
2a1c0a2026d0b2d9712d9b09e37278a3 *R/plot_reddim.R
8ec75343bd042b7802414e4a63fe1bde *R/projectReducedDim.R
1aa7399e2cdb1957be9d8300f137a9e9 *R/reexports.R
f1efac63323188eacb01e3819d5784eb *R/retrieveCellInfo.R
018f6a8f98e15906676fa07fbd20ef7a *R/retrieveFeatureInfo.R
4019ebb025230c3b19b81cf11f676eaf *R/runColDataPCA.R
c7e34afd1879ba05b49996d2bff79d21 *R/runMDS.R
eafed14ef807b1cb6ca158d028abb88e *R/runMultiUMAP.R
7314b890747e43ea2de19a15e02673de *R/runNMF.R
777b316cdc3f3ce5a35000c821f4e87b *R/runPCA.R
d23c8911ee2ff2008a6b26078a9f9863 *R/runTSNE.R
32adc6ac0d5705d5690bfb0162be21c0 *R/runUMAP.R
057204fb0796a7d8ebe9277acb937431 *R/scater-pkg.R
1905dc1bc011fbc8e63fad2fc5927bbb *R/utils_plotting.R
0ad4353837c44731a19c306180a9f773 *R/utils_reddim.R
d73c5b78d01877f245dd010850d461a8 *build/vignette.rds
4a45c71799006d8754b805cda43ab5a6 *inst/CITATION
56df1f9167697f6342b9cc61d0e8d872 *inst/NEWS.Rd
07cdcf2ec4831dc0818ebf8af989c82b *inst/doc/overview.R
96a43ffff51182969194f96b7a593c84 *inst/doc/overview.Rmd
973485cc876e81ca89d6052647fdff37 *inst/doc/overview.html
e2c260c556624ff60831740c04eb04d9 *inst/www/scater_qc_workflow.png
77af92f7f9e17bf0a369b8dee5503a7a *man/SCESet.Rd
7f714093ef88adb538e858c45600211d *man/accessors.Rd
e7b1b9704860b09c6b99f0663647be07 *man/annotateBMFeatures.Rd
803ea2f980c89b101cacfa62007d9ae0 *man/bootstraps.Rd
05439340a535194e24f0bb99f6244410 *man/defunct.Rd
63b98efc75df1a0b223d451c97c72e30 *man/getExplanatoryPCs.Rd
69a44699373b586ed5c2b113faf11b3a *man/getVarianceExplained.Rd
1d56e3796c67f85cc6a21419a2c96db1 *man/ggsce.Rd
50b5ad454da6780c31221c2d9fc026f8 *man/nexprs.Rd
bacb4f228e3a9a13992028ec99708b34 *man/plotColData.Rd
4b68e53db3cba50eae855e19a1a86afa *man/plotDots.Rd
ed17bf9a867782e683db5f7faebcee17 *man/plotExplanatoryPCs.Rd
f050627dc9d828bed5daf4479629c11c *man/plotExplanatoryVariables.Rd
80fab1a52ea8e33ab77b1abb2bba4291 *man/plotExpression.Rd
7748a1795cef0fb84f14f6e993363add *man/plotGroupedHeatmap.Rd
26680519a00d67cb0b496fc15bab05bc *man/plotHeatmap.Rd
f6092f5ddadd03be892ee2b745193b01 *man/plotHighestExprs.Rd
9558af83ab8b7d5d5b487caf343f0f41 *man/plotPlatePosition.Rd
4cdbc37e0673cf42ccf3a70f750d654c *man/plotRLE.Rd
4ce1645217ce6484636618d9ffcef3b0 *man/plotReducedDim.Rd
d560fe5b3b67b0c28d239a11314ae3c1 *man/plotRowData.Rd
decab8d21ce84b61c93af7bee9bb9881 *man/plotScater.Rd
6cf0b21648aa9d2e102346ab60f6f8eb *man/plot_reddim.Rd
63603020c947ee5b5d6399fa417eedf9 *man/projectReducedDim.Rd
36789375f079edb4125b740d1af9b96f *man/reexports.Rd
b78155590bc22019a3e5dae33706fb27 *man/retrieveCellInfo.Rd
70eb65af4c3d11ae9b994b41be179341 *man/retrieveFeatureInfo.Rd
0693849575aa7ab117eae77a3f913f34 *man/runColDataPCA.Rd
0ad3fe1643b44446b0e4e52b5280af28 *man/runMDS.Rd
1be4bff17eb0226e0d7e3d5ddd1298c1 *man/runMultiUMAP.Rd
933ac56899b60cbcc4e6dccb6b916154 *man/runNMF.Rd
ffa94bd5b1cf7e27095ec9189dca7de0 *man/runPCA.Rd
96bddb9d31b3eb994298d88e80c0972a *man/runTSNE.Rd
54952ec062cdb27b4dd5dbb3892e44e2 *man/runUMAP.Rd
817c4a5fa686891309b0b888b66f10d8 *man/scater-pkg.Rd
c3613c78a8a2ac4265387b630bd7650e *man/scater-plot-args.Rd
11d8abfe51c490b0b165e440e88e6e58 *man/toSingleCellExperiment.Rd
a76bb1c7f8f6fee3b5791fc1a04033f7 *tests/testthat.R
993fb721fb606cf631b8a40de41ad922 *tests/testthat/setup.R
9b86b33ea6db03cc20ead89740e63e33 *tests/testthat/test-SingleCellExperiment-methods.R
011890ad1f9320482a57747151ca0453 *tests/testthat/test-expl-var.R
d0f1285bce9b7b5150b0400aa9711e74 *tests/testthat/test-nexprs.R
2e76da89f1414bd7d2db6979fd0f4a65 *tests/testthat/test-plot-dimred.R
e46d4e7dd605ce1a8907d453ec12a132 *tests/testthat/test-plot-exprs.R
7c5268450f3189a1db4ed46ec6600b89 *tests/testthat/test-plot-heat.R
a419196e06be4940d5dc15b3cf57ad9d *tests/testthat/test-plot-other.R
f52aba98b07995d0639bbf69c869b33b *tests/testthat/test-plot-scater.R
d8ede3c4bab1db04490417e417aff00b *tests/testthat/test-plot-utils.R
067e85c1102523ce92ccb431501a0667 *tests/testthat/test-qc-plot.R
28f2813aeb679cbd1780389e2f0c4692 *tests/testthat/test-red-dim.R
96a43ffff51182969194f96b7a593c84 *vignettes/overview.Rmd
