fdd12f11584fc3c14a26636b4d0dc971 *DESCRIPTION
b509253a0e3291314ced3a06f9c9325e *NAMESPACE
33b2163a9bdd417bdd846d6676d94b39 *NEWS.md
f96901d03ade6bcc634adb1054493bfa *R/RcppExports.R
f049d82efb0529a85924d26dd523dad6 *R/io.R
9db64c33850bcc577a6913a193a55a65 *R/scMitoMut.R
931a5cdcd13244c5a182d8988fb5ba5d *R/stat_betabinomial.R
051c5e983feb6284b8a18bb09d01b3e9 *R/stat_ensemble.R
6ab48f97411945c8027dd9e4c9570dd5 *R/stat_mixbinomal.R
1ca2ac8d07d72629f0d1d8c7d5be315e *R/stat_summary.R
0aaa0b4f2a498bba5534cdf8de5e831f *R/visual_static.R
0bb4ae8927c840ed78b6465937e40213 *README.md
39b915aca9ffe28f7dd168eb8634d00e *build/vignette.rds
e485698828e3c87e9085f93fbb43bc68 *inst/doc/Analysis_colon_cancer_dataset.R
d16c34d134e9a43b11c2a450016c6c7e *inst/doc/Analysis_colon_cancer_dataset.Rmd
78adb4daab35167d24c0e4913b145dd5 *inst/doc/Analysis_colon_cancer_dataset.html
38e0c8cf6f31a57f66576ddaf689154e *inst/extdata/mini_dataset.tsv.gz
d445d39da088cec6c5c38de306ec02a8 *inst/extdata/mini_dataset_cell_ann.csv
12ecf4afd392f1fe71f29744324ffe7d *inst/extdata/mini_mgatk_out/final/chrM_refAllele.txt
7771900f99b9329c4ae863189c6d8bcb *inst/extdata/mini_mgatk_out/final/sample.A.txt.gz
11878e1d5c95e58bd527bffcb1bc2bdb *inst/extdata/mini_mgatk_out/final/sample.C.txt.gz
fd96c7fbd7edaa252fadf4d29dd40fc3 *inst/extdata/mini_mgatk_out/final/sample.G.txt.gz
70c1749da99dbed12bdead028ed71575 *inst/extdata/mini_mgatk_out/final/sample.T.txt.gz
51199c6eb18c8ba4d362d3233854ac3b *inst/extdata/mini_mgatk_out/final/sample.coverage.txt.gz
fe1c6a66d0a5b5a67d315ce553ce8860 *man/export_dt.Rd
febf8ea5d2d54374daa77ef6a12f598b *man/filter_loc.Rd
c1910619845b97fefbbc14bca4dd2d23 *man/get_pval.Rd
a25029a6f23d3cc87e8df0f97d320de0 *man/open_h5_file.Rd
b9d2b86badd08919a7a588b518dd2d0d *man/parse_mgatk.Rd
0816140051d9dc1699313abea35981b3 *man/parse_table.Rd
cde5a26dda5c0d770ecc7ae9586dc636 *man/plot_af_coverage.Rd
3a41332a22b34b1b6466d14117a8c3da *man/plot_heatmap.Rd
0080b533318c2da66b35aeaa3b038309 *man/print.mtmutObj.Rd
732663060c3c8e8579700d1f0adcd334 *man/process_locus_bmbb.Rd
0c18e3e4d5de7c8065d6d7ad82c5e947 *man/rm_mtmutObj.Rd
718ee2c6d76b9306f097e63a4d671c3a *man/run_model_fit.Rd
cedc41758732ad1decd3c5a63766e8ad *man/scMitoMut.Rd
97547b1e4547bc91e6fcdcc54fe3c2a3 *man/subset_cell.Rd
5d17bec47b93b35c9effbedac0d89be7 *src/Makevars
b8b9543d3811c1ea974a6cb4ac1595b4 *src/RcppExports.cpp
8fab3905eec12f64ba6b310e81fec61a *src/em_bm.cpp
54b9884f251a52ce4c84fa2ce7b4956c *src/mle_bb.cpp
c50dd818b21cf9cb1796568bb85d6058 *tests/testthat.R
f37f64a6e94d83d1d797be86bbbd13e3 *tests/testthat/test_bb.R
36db56613d57fe885434a5386b1c5b3b *tests/testthat/test_bm.R
1b987e6ff030a6f9dd0099b783f5143a *tests/testthat/test_main.R
d16c34d134e9a43b11c2a450016c6c7e *vignettes/Analysis_colon_cancer_dataset.Rmd
