bc3e42afb313bcbda3bb2283914f335c *DESCRIPTION
6df628617732581a8595db978b4c7179 *NAMESPACE
458eaf632280dbf62a3da49bc9830329 *R/build.R
4e19d794971249d0a323189d443a40e6 *R/data.R
ee6df562623e9c858f5d40aa35aa9862 *R/higherOrderFunctions.R
add8f2f24dd16e84dd680df58887ea34 *R/scHOT.R
1f0af08f454584cba701f6c5c086ba36 *R/scHOT_class.R
7ca63e969105dbd50cd31892ed622fe8 *R/scHOT_functions.R
65a383e94abbc7dba878d6238426120b *R/scHOT_plot.R
4d8fd0548dae25f2d31531355ea9488f *README.md
6ebd5232929786b583d7f3418034e70b *build/vignette.rds
cfc029151df9113ccff429c7fabbb7aa *data/MOB_subset.rda
a3535a07eb408a1f8438a3e6cd759ed4 *data/liver.rda
d64836e5146eb04d582a379bb9606168 *inst/doc/scHOT.R
b7cb56d7bcb73337329c53e5de05f4bc *inst/doc/scHOT.Rmd
966ae810095ae08994718b2cec8b4063 *inst/doc/scHOT.html
9d70be155f14a51f72e7f9809b56c830 *man/MOB_subset.Rd
c2dbed06abb372245fcd7f7c616842d5 *man/liver.Rd
78988cef6a9b1a31211f08857a639dbe *man/params-set.Rd
ab4a3515d3d8c041481d75b3da09e9b0 *man/plotColouredExpression.Rd
ee13f22689fc2dd18ac6d9214f6a25fc *man/plotEgoNetwork.Rd
982e6a0b697d15569bb2f79efd070ad1 *man/plotHigherOrderSequence.Rd
e0e40c6cb4861a89371b66f966f5a30d *man/plotOrderedExpression.Rd
d0e08ef8253308e2a3845a32e4b4a6b4 *man/positionColData-set.Rd
32bb39aec11d2efb3b961c64aece341e *man/positionType-set.Rd
59e9e096cae094f98f28f2a6528fff25 *man/scHOT-class.Rd
1886fa91f9a2204f23abbcd424735c65 *man/scHOT.Rd
9448331b558739ca3d2b931fb0a09ce1 *man/scHOT_addTestingScaffold.Rd
41386dcb011962326e060f1369a52682 *man/scHOT_buildFromMatrix.Rd
99fdc95414e8ac1b85249faf8341eb35 *man/scHOT_buildFromSCE.Rd
1363afcc9b32a7000fce577adade96b0 *man/scHOT_calculateGlobalHigherOrderFunction.Rd
b2547c591fcf8ad5b9c9e9bcf7e4f375 *man/scHOT_calculateHigherOrderTestStatistics.Rd
31bdafbf6c1a90317013c2716f1cb486 *man/scHOT_estimatePvalues.Rd
ea1f4fb2dfdc2849e0749ae1e53c0e26 *man/scHOT_output-set.Rd
c0641c41b47808c0fb89a6aad0f6edf5 *man/scHOT_performPermutationTest.Rd
c6bcf3d755105706bb764bb3f5bea22f *man/scHOT_plotPermutationDistributions.Rd
5db76a628932e3adfa4b62e9a37d4bb9 *man/scHOT_setPermutationScaffold.Rd
55ab92e2e782c52a86e9611b737c6b52 *man/scHOT_setWeightMatrix.Rd
39204e558d40f3a89dc5cd785df1e281 *man/scHOT_stripOutput.Rd
b73baced18887854c2ef135de84a05e5 *man/spatialWeightMatrix.Rd
24cbcda10402ead8f3277b687a78ea1d *man/testingScaffold-set.Rd
c6e6ad1066eac5db0f56d615853f8c54 *man/thin.Rd
60e9aafd88c6165234727e4ba4dfc201 *man/trajectoryWeightMatrix.Rd
efffc29a8798b59e56d546008c419f4a *man/weightMatrix-set.Rd
b6401d5f0ef4e732a9c35fdc5e42c0c4 *man/weightedPearson.Rd
48bd042f885c7ea87f6acbb607ca4e74 *man/weightedSpearman.Rd
20abaf7b7f25b3ee1fdb2430ccbd7ca0 *man/weightedVariance.Rd
277c30d9bc94a14977e9eb38e140df1e *man/weightedZIKendall.Rd
c55becf5ce3a1d9879a8a4694f39abf7 *man/weightedZISpearman.Rd
b7cb56d7bcb73337329c53e5de05f4bc *vignettes/scHOT.Rmd
