8fb1f1ccb01207638ec4aefcc124479b *DESCRIPTION
04ef5199a30f2480d9f8ce87d145c272 *NAMESPACE
cc294080f57160c624776b7a134ce4bb *NEWS.md
92017601d31c3e830755fc9dc091863e *R/compute_ssFC.R
2692f4a0f7d947d724e497246155c2a2 *R/data.R
a7e1040426afd546beba1ef1dbb5c722 *R/genePertScore.R
724c19f5d723ae5e92bdb51e7e9c00f7 *R/normaliseByPermutation.R
bc19374889a701b0f851137bfe629e0e *R/pathwayTopology.R
54fba61c6dbac6281f59b79ef0728b13 *R/plot_GSnetwork.R
238a50827a69b496b25d64a77177ee8f *R/plot_community.R
11cdcc848a6744830a348f9f00b0a127 *R/plot_gene_contribution.R
6243b3522f88bb963a42084501bd57b6 *R/plot_gs2gene.R
c56bec7f7ffbb1c65534a72381c38fa3 *R/sSNAPPY.R
7cee2121552e9f780113386e881535b1 *README.md
8a2a4a0780e41e9591c7df9306ce0b15 *build/vignette.rds
a32872fb8ce662c29d410386978abec2 *data/gsAnnotation_df.rda
e6230cf277388c59b00e4c0d1d487490 *data/logCPM_example.rda
43adb144a52130dcfe43347fafb15a94 *data/metadata_example.rda
0e552b43906f5dbc9986be902e2fa4c5 *inst/WORDLIST
d4f7733e272f4d905fad97401c94c293 *inst/doc/sSNAPPY.R
d115e0507f3cd39ca1def16e6c47a831 *inst/doc/sSNAPPY.Rmd
f7ff0d0444a737e078a9a1cb34da2b86 *inst/doc/sSNAPPY.html
4afef15262da5d2251cb7c3bcdc240f1 *inst/extdata/entrez2name.rda
59a68879014859b422b17e43a9cb649a *inst/extdata/gsAnnotation_df_reactome.rda
1b67dca180cae519be7883b939c112f4 *inst/extdata/gsTopology.rda
be10b251fff6cc36ecbdf69085acdbd6 *inst/extdata/normalisedScores.rda
4532dde8c31aa80960fc0d1f2e7e5388 *inst/extdata/permutedScore.rda
d26daa1f543a51df0eafa5168f374aff *inst/script/extdata.R
ef703fe18e9d3ab0d30c03d6b34d2536 *man/dot-compute_ssFC.Rd
62b2c51fd95784432946ff8dee8d388d *man/generate_permuted_scores.Rd
b84e06acd2fefaadc476af63e3d7118d *man/gsAnnotation_df.Rd
6ee5e8a8ddaab03068f29103ab090286 *man/logCPM_example.Rd
7d9944fc6948d35fb9ff62a8415f44c6 *man/metadata_example.Rd
372d2bc342633ffd9665fd00e4424179 *man/normalise_by_permu.Rd
5a193e261cfaf8906dd8f6e054832a27 *man/pathway_pert.Rd
2922c2cc001bd081de2191ede6db6d77 *man/plot_community.Rd
446768ffa0416cacee9bb9b67d921195 *man/plot_gene_contribution.Rd
5c84d1b661ddd4bcc60c07b5d4e8d746 *man/plot_gs2gene.Rd
61b607f1cb50b11ebc334193926c9272 *man/plot_gs_network.Rd
5202a443663d29c762e4621a81e75695 *man/raw_gene_pert.Rd
2a6fae759817ef4f1271d6c36e0acdf2 *man/retrieve_topology.Rd
121bc8b918bbf1e6029a539aa9b0fec8 *man/sSNAPPY.Rd
c3aa4e0b904c18dd2e8f89bff261e766 *man/weight_ss_fc.Rd
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
6d5329facd7b53c361d6c8a2d28eea7d *tests/testthat.R
4b323a6ae0dde223a4e31a9a882a525e *tests/testthat/Rplots.pdf
9b58a9b31413d0810866e02c73475ddd *tests/testthat/test-genePertScore.R
efa41653f88d26d492321a8c920c0276 *tests/testthat/test-normaliseByPermutation.R
ec31071ef3d6c600931a15a9d3c39610 *tests/testthat/test-pathwayTopology.R
b58ae73e6f6b5e616fe11dce03da9e8b *tests/testthat/test-plot_GSnetwork.R
2b92be124e1d4cdf4fea16772cea79a6 *tests/testthat/test-plot_community.R
438340ac51d42f766e77001b4a35b1bc *tests/testthat/test-plot_gene_contribution.R
92f9cb77cddb881d2b6bd962afffabad *tests/testthat/test-plot_gs2gene.R
63ee5658347219ff98a382a02577f721 *tests/testthat/test_compute_ssFC.R
d115e0507f3cd39ca1def16e6c47a831 *vignettes/sSNAPPY.Rmd
