c0b2769901c7e35ecf35239e35e2f45b *DESCRIPTION
6d49b2444c3a5da30d6e04e29b1dc5a2 *NAMESPACE
e13773b2580285bcd66633aaf960ed51 *NEWS.md
7259219f5d33f61928f218d11332bafe *R/AllCloseByRegions.R
185d5c9880de14bf434ad62ab59449ec *R/AllCoeditedRegions.R
2ce5603c198cce76841c7ad48a1e4c2b *R/AnnotateResults.R
9f62d0e5fdfebc7e11d841b8de95aa0a *R/CreateEditingTable.R
81baea2b622746d6db36cbf628bd2166 *R/SingleCloseByRegion.R
b62b5dad5dd3dfc00d363e3ef76f9371 *R/SingleCoeditedRegion.R
08e4a482baf877617c0416e9b2f3c495 *R/SummarizeAllRegions.R
194b85b739dbeba0bd1e26da17c8072a *R/SummarizeSingleRegion.R
d2396ad08a20dfe01421341d56ddd2b2 *R/TestAssociations.R
1341f772fbaa18d27e0c88154ae02d05 *R/TestSingleRegion.R
eca780576c05152a2d9406dea1de8b3d *R/TransformToGR.R
7d17218e2e7a2e9dd9408a707b74572b *R/data_rnaedit_df.R
b5343fecc629889ace89e4fa464111f6 *R/data_t_rnaedit_df.R
e6fecc096c1f36ff1e11ff166fa32565 *R/util_AddMetaData.R
7bef773b1eeb1db04f9d45c5394fac7e *R/util_CountSamplesPerGroup.R
979507501f0eb3036afdfab29adcce4f *R/util_CreateOutputDF.R
8d204fdd523f258108d50f3fe44748fe *R/util_CreateRdrop.R
78de7c11d1cd38df557364a04712edf1 *R/util_FindCorrelatedRegions.R
f32cde8c79d86616e5287e747b16e1f9 *R/util_GetMinPairwiseCor.R
6b5764beb1a0a5638c3d423cc3f8721c *R/util_GetSitesLocations.R
eca03111b7975ddb86de7c347f593283 *R/util_MakeModelFormula.R
fe0fa3cd7eab7232287f546856a601eb *R/util_MarkCoeditedSites.R
9906b36214aedb52c5d547c7aeebb038 *R/util_OrderSitesByLocation.R
3cd362a215bb417bd60b956bacc02e9b *R/util_PlotEditingCorrelations.R
f63e633d689e97596d0717ebe02d084e *R/util_RegionSummaryMethod.R
15bcc82a751a2d9a8cea55178a99b514 *R/util_SitesToRegion.R
6ba9e8be638474f8eed99b98aed8def4 *README.md
08c9383fbfa9a28584f0095563d25224 *build/vignette.rds
d3ef916f6bc8998f1460446c7b1c5e1b *data/rnaedit_df.rda
b1eb1b0834a6d6661d1bc0870b6d139c *data/t_rnaedit_df.rda
a50e965605f2c98ad699ded4c38aeba0 *inst/README.md
684805bb2e63c72118ca62aa403ed38c *inst/doc/introduction_to_rnaEditr.R
046c618d5623a9c6707a9138e826f748 *inst/doc/introduction_to_rnaEditr.Rmd
96de5aa3a0edede61a4401129b1e6b22 *inst/doc/introduction_to_rnaEditr.html
1594809923f2ffd9de7c9c9aee791201 *inst/extdata/hg19_annoGene_gr.RDS
02247db9010a7c0386f565e3cd9aaa3a *inst/extdata/hg38_annoGene_gr.RDS
0bb0efb4bff42b524bbda73dd532b79c *inst/extdata/pheno_df.RDS
fe1572b07780502a9bc0531950d03292 *inst/scripts/1-CreateAnnoGeneGR.R
99c1cc8f0376b3bef1e4cc5ef650ea46 *inst/scripts/2-CreateRnaEditAndPhenoDFs.R
32bab786a5b146cda9d78a99cd59e60c *inst/scripts/3-Create_ex_data.R
ab4b19d070cbceebca57a641287f5900 *man/AddMetaData.Rd
7cc45d6eb08254df35c7f6375ffb114a *man/AllCloseByRegions.Rd
7755a491eb6102e7e413f1e4cd5da08a *man/AllCoeditedRegions.Rd
9952fc5aaa260856518d6fd219e54501 *man/AnnotateResults.Rd
36f57d533b611b622d13e46ad11d9231 *man/CountSamplesPerGroup.Rd
071efbc99c029dfb3b443eb7b57f6436 *man/CreateEditingTable.Rd
947ee81e3e727eab05bd1d2f1994bac4 *man/CreateOutputDF.Rd
19070e861db32e81988d16a47d5019a3 *man/CreateRdrop.Rd
780ea74aac1a99a920e6fd6b9f3821e5 *man/FindCorrelatedRegions.Rd
cc687a2f9302403a63c8926db43fe031 *man/GetMinPairwiseCor.Rd
7f9eef60327367713cfc34e26476dec1 *man/GetSitesLocations.Rd
36470a3ffe0fcdddd005fbb26c9570c1 *man/MakeModelFormula.Rd
75d3fe1cb8c030e4ba8f598c70ed3583 *man/MarkCoeditedSites.Rd
da612c04074e72c820c0c56db4442ab2 *man/OrderSitesByLocation.Rd
aba269a74a16d52b6a41e9e202f692b3 *man/PlotEditingCorrelations.Rd
8ba24b378688c31ca05818b2fb6c9e4a *man/RegionSummaryMethod.Rd
a94b3495288a359647d708362a77e884 *man/SingleCloseByRegion.Rd
fc02cce7a2dd444d302e3b6e0a8ad8ff *man/SingleCoeditedRegion.Rd
bee75e51c82257167190e8658b85978f *man/SitesToRegion.Rd
6f38b521148788096dae12b6918c4db5 *man/SummarizeAllRegions.Rd
e99af83003c8759f5e00d43290ddcaf2 *man/SummarizeSingleRegion.Rd
d0f5ae77289919082c284ca631bb41f9 *man/TestAssociations.Rd
7c67957d49067e2b89e40e314bb40d81 *man/TestSingleRegion.Rd
540c30e8d2cb8c0ab006a1138ac78128 *man/TransformToGR.Rd
437991faf177f52b1df6d29aac81ec9a *man/rnaedit_df.Rd
2ac6537be8bd5793dd94724a7c2fe639 *man/t_rnaedit_df.Rd
444d196e30330882b747e718b37a7aa9 *tests/testthat.R
9034d4cf726da5ab87fbd05df844936e *tests/testthat/test_AllCloseByRegions.R
79d972a6d063bb1c303c819b4e7b664a *tests/testthat/test_AllCoeditedRegions.R
c79d4f3839ca3f53e8e069d30ad10f36 *tests/testthat/test_AnnotateResults.R
f6054fd27e7810e1fe9c8c8386efca76 *tests/testthat/test_CreateEditingTable.R
6938ea9b6ed1f894371472e135e15a4a *tests/testthat/test_SummarizeAllRegions.R
02206f9832aeac89a9ea6f372f9eef25 *tests/testthat/test_TestAssociations.R
422f482fe3f01aa247aab8b051d44fcb *tests/testthat/test_TransformToGR.R
046c618d5623a9c6707a9138e826f748 *vignettes/introduction_to_rnaEditr.Rmd
4aa33d291a0cb89a83b1d10bd5718dcc *vignettes/region-based-analysis.png
51bc469543ffcba22bde87a13ec2bc9b *vignettes/site-specific-analysis.png
