00d2e633b493f21ab60790ba0ca6702c *DESCRIPTION
c80ce724ca72de4807a912346a9ab82e *NAMESPACE
fcbba15fee6cf289849a330715b16582 *R/AllClasses.R
917e587471cde0da18041d91d0abd9d2 *R/filterHits.R
1ee708947b139c45e6e1b8f263ce829b *R/findCDS.R
a13cade07c4e812a93a82ef650931b87 *R/frameCounting.R
27049039a8876575c6cd994eb92d4d95 *R/frameShift.R
bc7eabc9f278696f51d740c3cf1abbab *R/lengthDist.R
1da69bca291dd6edd07ff02ab09711db *R/libScales.R
a4b7b57b4b74afab47269934252bab07 *R/logoContext.R
2f072a861a8942c4e7556dd5a1cbe3f9 *R/plotCodons.R
5e9f3f3f7e147fc637a4a8652a423931 *R/plotTranscript.R
fe2f1ca5e9883e01f5686f830996d3a2 *R/readRibodata.R
9373de80f40c5a3bd74589e04776ed20 *R/riboCoding-methods.R
215f347a78f9de0d53713ac8ba60be6c *R/riboSeq-internal.R
b31d7362c3e844f9830b8bacc3bbf37e *R/sliceCounts.R
402885aa2525702d9b128510f4e42431 *R/tableOverlaps.R
5717cf484e98a7416e112b8fa9cdcfde *build/vignette.rds
be00dc3ef85e40f36a37acc8236e0745 *inst/CITATION
dd6d15695102fe4bacf37d889dbed274 *inst/NEWS
19e2fd0033ee2f26b6b78e3247666845 *inst/doc/riboSeqR.R
b8efaec59040333830e9d0430344e93f *inst/doc/riboSeqR.Rnw
cf2a10928a37bcc194915e9a0c262fdd *inst/doc/riboSeqR.pdf
5429714c438d0eead4f8d1046b4675f7 *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index10
37bf5961b1d39b82617a908a6ab91d6f *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index12
fa4a11215f729a40d0ee83a465d51707 *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index14
6d86391b050699ebdef662814c2b18ae *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index16
943ee31497b16553803b5608999af7ec *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index17
c6c5ec99bd7100e93d5d2fa426019caa *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index17_short
753d055ce14d4eeeae0ac6c58e53401f *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index3
bafc28c7e8c9cf45b2071f103312b652 *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index5
c1942d27b58c5bbaf9d31d859c3b4d59 *inst/extdata/chlamy236_plus_deNovo_plusOnly_Index7
c2e8ad282af5dd958070c1e43acc69fd *inst/extdata/ribotable.txt
df7b46319adc89d4634ecf8c1efc12b0 *inst/extdata/rsem_chlamy236_deNovo.transcripts.fa
78f67b94d6efbca8650e316735fa3100 *inst/extdata/unit_test.fasta
88e3a9eaff9e709fcd8d1cdec28f2519 *inst/unitTests/testing.R
49ef9734eeed0e2397cda04efd63760e *man/filterHits.Rd
24fa73b6c483555f3457afe6e492b366 *man/findCDS.Rd
50056e28439d0300e0901638d885fe0e *man/frameCounting.Rd
8c4e214303b225fa5d5708e19eaa2fcf *man/frameShift.Rd
8d462002946456f3c6daae984f1a65ed *man/lengthDist.Rd
cd8e8d0afe666a3cf7aa0265b86020ec *man/libScales.Rd
ad9eae13c64145ebd48d3edea782940a *man/logoContext.Rd
b9b24203ca7364e08c1d275fd542c07e *man/plotCDS.Rd
049690efe79e8ce562e177c9645075c6 *man/plotTranscript.Rd
e7e67163d13fa934755066f6a4094602 *man/readRibodata.Rd
c78a7d033cdd66bffe21f0d9517d0c4c *man/riboCoding-class.Rd
3fb11d2118ddbb173e673472f35f45dd *man/riboData-class.Rd
ca00eb9ed331401ff43ed82ef81741bc *man/riboSeqR-package.Rd
1f6de7bddc14e7ef60054fe351cf7ffb *man/rnaCounts.Rd
77e078aa33bddcf4a42b0f729af013cf *man/sliceCounts.Rd
0dd5c85e569886031f5e09bd1b7c4f40 *tests/runTests.R
ae2ff07e04e6e1f9c011d888d674ef23 *vignettes/_TZ_14128-node7-plantsci-internal-cam-ac-uk.tex
b8efaec59040333830e9d0430344e93f *vignettes/riboSeqR.Rnw
