87bb9f0a95b6913d88039c18a489a33b *DESCRIPTION
34fd531b1981aa0b2dd48eff8c7428b7 *NAMESPACE
c175438be6cf0575cafd06ddd38439d0 *NEWS
88f7c3c0dcabc9195489b40bba3e3faa *R/qsea-classes.R
45bfd0aa511a9c7caf04c9f475195078 *R/qsea.addCNV.R
e555f2ec0d5fe8f6213d88330afffe7f *R/qsea.createSet.R
927591a9b74a5bf9525fed375313ec3b *R/qsea.example.R
f75916c87c93ff80428c3d66eb4a2c82 *R/qsea.genomeWindows.R
c5b4b91fb358775c6472e69958bfac13 *R/qsea.getCoverage.R
78df4b4104d8f35ea8623e575f8a5c54 *R/qsea.glm.R
6c375fb9bb889fb7f5bb98e0a64cb6dd *R/qsea.makeTable.R
8c0b52f171ba36c9effba1805d8bf1f2 *R/qsea.normalize.R
570933cb72ad3508c98fc20095cb17fb *R/qsea.plots.R
07dfcb1bad40ae47398ce605e123a000 *R/sysdata.rda
5dbe593c7bbda0605abd3b2896acd2ba *build/vignette.rds
2854b6f0f157cfad5da7a20f4a5621f9 *inst/CITATION
6f4adb620361ba6904f5acd07f2388b6 *inst/doc/qsea_tutorial.R
a0eda575cd18982c5c6c1ac8b349612a *inst/doc/qsea_tutorial.Rmd
071ab4b035152c38b5219a8643ec739b *inst/doc/qsea_tutorial.html
4f63eec5c6346e7c78c2bcabe1235e1d *man/addCNV.Rd
351b01b8593b35608f90b365454f4b7f *man/addContrast.Rd
e4c35d9391958cecf698b48fb608e1ec *man/addCoverage.Rd
6ce55e817e628eb7fe4a34c7694302a3 *man/addEnrichmentParameters.Rd
da3c3b5d22551ce1c8e8d7bae43924da *man/addLibraryFactors.Rd
00ae4b55ee274c3d8c062e4359773516 *man/addNewSamples.Rd
e6fc1081114c7a7190db1dd343ba4604 *man/addOffset.Rd
b71fe849f001d30e5f8875c685a2f36a *man/addPatternDensity.Rd
61570295369f66543b50d4214bd0ae90 *man/addSeqPref.Rd
1a5945d0c9b74f293dca46cfcb03d32a *man/createQseaSet.Rd
439e5c689b8842d9bc6992ed92e439c6 *man/example.Rd
d04f7785baa7ea25be14f64c6d1f2418 *man/fitNBglm.Rd
c9a5959636fb4e5fc711d621abc1e6e7 *man/getPCA.Rd
5c7051b4e6475637db6475a81f94fd7f *man/isSignificant.Rd
84b44b6124280f88138837a3d25a912c *man/makeTable.Rd
b1d21cb52f8e848c14669e8bf4bd25dc *man/normMethod.Rd
32ffc33bbabb95af37466ad4ec97b7d8 *man/plotCNV.Rd
9ae939f1cf5bbce93891ae62335332a1 *man/plotCoverage.Rd
77c93ae7172ede5b14de99f84f1fc6b5 *man/plotEnrichmentProfile.Rd
efc461e8ab1950e8fe1bc66ac6e8abcb *man/plotPCA.Rd
cae01fd24f92c3ff2c08556a3720133a *man/qsea-package.Rd
5a2275155deeb3b748f926d2424c3b3b *man/qseaGLM-class.Rd
4213918fb00f470f83290d7f13ba1be3 *man/qseaPCA-class.Rd
2bd6640c6ad849aa9fcc8e13b9302222 *man/qseaSet-class.Rd
fbb9791ed1c2bf902d87cd659836d000 *man/regionStats.Rd
17327a373c45905c57b4948a40ae8706 *src/lm.c
4a06d6a96be121c2d3cf33739f966490 *tests/testthat.R
fc3ac70a1b3fc6b38691d148a648e848 *tests/testthat/test_example.R
4a99b21b8ea1ffc404369db4bfd57354 *tests/testthat/test_glm.R
8fe273cdca25b9a40ba8447247f4134d *vignettes/qseaTutorial.bib
a0eda575cd18982c5c6c1ac8b349612a *vignettes/qsea_tutorial.Rmd
