9f5ae54edaf274f3b530efefd7623011 *DESCRIPTION
d000516d2087abfcfe4c2c00fd9662ba *LICENSE
6c19e72d86d7b5dd1d5f7a7e40e323a2 *NAMESPACE
8e889212f2a5850ea54cfbb4d38ced72 *NEWS.md
badba1e35d22e00a1849f927ca6f47f7 *R/centerExpandRegions.R
c3dfc68ae519ab3936ea625fa07394f6 *R/centerExpandRegionsHelper.R
0631b23995258cde14c04f6b0dc1b24f *R/checkDataStructure.R
68dc2675edb9a65d6b5f2a7a3e670315 *R/combineRegions.R
fda2dd299b084f0d2c31647f049b14b7 *R/combineRegionsHelper.R
fe779848a8450c75352df433358f2dd1 *R/data.R
ae6ef822cd51a234a39285237a1b6d07 *R/filterRegions.R
4226c1f589925d23ce7291beb2a27559 *R/filterRegionsHelper.R
536c7299ba5808fab47f49cf9bba85ed *R/prepareInputRegions.R
2b3f7a35dd9fb7e4ab145432240dfb40 *R/prepareInputRegionsHelper.R
8e511463b7b7f0e004b4ae40e63215d9 *build/vignette.rds
0dfd55b7078de6bab0670c4aaa95d305 *data/syn_blacklist.rda
2e9355c30d6e23573b779f6ab35e6bea *data/syn_control_rep1_narrowPeak.rda
1b9fe917d2b0e082cf416daf3c5dff4b *data/syn_data_bed.rda
fc74a5d6e4fc0661a0adf4cd357ecc88 *data/syn_data_control01.rda
974f87ceb71cc3999bdd06251716077b *data/syn_data_granges.rda
431f7acb812a6640d895cda93ec6785e *data/syn_data_tibble.rda
4e140b8cf71e8e9a9b2847b28ac0215a *data/syn_data_treatment01.rda
904c30045f23e15fb5b71cebb7d2eb25 *data/syn_sample_sheet.rda
9d9dd3579b449a672b401fe27ecea4af *data/syn_treatment_rep1_narrowPeak.rda
e99607919708fc2a711e37a3fa63eb90 *inst/doc/peakCombiner.R
8a18b3e1de2a37ac03f0bbf2e750c895 *inst/doc/peakCombiner.Rmd
3d2dfc02a10833e373b58d1b600e84ac *inst/doc/peakCombiner.html
0522221db562932b5a213c72fad68377 *inst/syndata/syn_control_rep1.R
1630e0ef6ac65712f1411cef18fcbe10 *inst/syndata/syn_control_rep1.narrowPeak
76561af2edde102d0f243d71152bea8b *inst/syndata/syn_control_rep2.R
7a003b2d1dbe187714ae5f0c8eb202e1 *inst/syndata/syn_control_rep2.narrowPeak
58554f21c184ceba3178a4e6b427157a *inst/syndata/syn_control_rep3.R
18e1d6fc279d759bb6d7019444cd21d9 *inst/syndata/syn_control_rep3.narrowPeak
9379c5beb1ccf634bf858663b8ea6463 *inst/syndata/syn_treatment_rep1.R
5cf8fd396b2c392f45c22b4d126c5023 *inst/syndata/syn_treatment_rep1.narrowPeak
dfd972180f75af10770260a6a090fca4 *inst/syndata/syn_treatment_rep2.R
8c64de813354dcba73ce809a95d1a6fb *inst/syndata/syn_treatment_rep2.narrowPeak
a836cba0ad52c66a312f12b8d309fa53 *inst/syndata/syn_treatment_rep3.R
e36e741fcaa957bf5b9addca455e1e35 *inst/syndata/syn_treatment_rep3.narrowPeak
5d0affbf46f76929e639d0b5ab78bdbe *inst/syndata/synthetic_data.R
48ac0f5001b45a097215a0a542fcf4f6 *inst/syndata/synthetic_data.bed
e94bb610cf45d3ae235cd91fbd233923 *man/centerExpandRegions.Rd
4596427be8c77be2f50a14e52f2b8774 *man/checkDataStructure.Rd
ae29f78a4d16da22afbb273fa8a102cd *man/collapseSummits.Rd
d5c378e373b1912b2d1d57afbd4f904f *man/combineRegions.Rd
4244d6c344becbf0fa2399f14f73b287 *man/crAddSummit.Rd
f864b18d576a174ff9aa8aaa6165df3e *man/crDisjoinFilter.Rd
fd74c65873db72d6f732a038f198ae0e *man/crOverlapWithSummits.Rd
b0191a5bb5f16f8145aa1e0ab3e6e326 *man/crReduce.Rd
865a50db67ceb889e0bbde2318b2b84a *man/defineExpansion.Rd
57e9bf292463c3b08106b9fa44c511bf *man/filterRegions.Rd
7df2b354e0cb9074e9a7f52ff0e52723 *man/prepareInputRegions.Rd
241e542ceb70bfa9e72591a0e591a17d *man/syn_blacklist.Rd
859400375eb3d0d6df4ca5d38a088456 *man/syn_control_rep1_narrowPeak.Rd
c26c168ad583120abf845860be68a146 *man/syn_data_bed.Rd
4f44d094d25fe3f44b21af9e598e4796 *man/syn_data_control01.Rd
fa2874b9c29fe0e000f161e0b2f676e7 *man/syn_data_granges.Rd
0d25b22ba973a147a42a0ceefc5bc5c8 *man/syn_data_tibble.Rd
e3511960e548374e6c53e25f32d314e6 *man/syn_data_treatment01.Rd
17a2521cd165e1011fb544d11d649030 *man/syn_sample_sheet.Rd
6e18f303e8cc73c0308328f4b7db1eb1 *man/syn_treatment_rep1_narrowPeak.Rd
e3458da6c5b6c9d325fb85f58dec71f8 *tests/testthat.R
b97808c9b1d864b1d8c8fc940537fef6 *tests/testthat.Rout
f6a2e1bbcc0a9b3247a522e1d4f37f43 *tests/testthat/test-centerExpandRegions.R
dd6c318c0242caf952f26f883fa7d756 *tests/testthat/test-combineRegions.R
ae923a09b7443c92c27befb59832b470 *tests/testthat/test-cr_add_summit.R
67caef877c975db7cdf30da2b5d09d6e *tests/testthat/test-cr_disjoin_filter.R
f61df51499a8128aff8b61d2c3c62d4e *tests/testthat/test-cr_overlap_with_summits.R
4250f117e2f37c8e8dad8d1b1fa3b6a2 *tests/testthat/test-cr_reduce.R
0394db7578693df0db58f2ef99c9a850 *tests/testthat/test-define_expansion.R
0369ad4a5b3d77e17354a224299504ad *tests/testthat/test-filterRegions.R
82dd870a7c6f866ed69868fe423a2846 *tests/testthat/test-filter_by_blacklist.R
532e632c6234105834acecb2ce62186b *tests/testthat/test-filter_by_chromosome_names.R
6e303f25c459b01aa19e1ae2c6bed2d3 *tests/testthat/test-filter_by_significance.R
44789853a478c8d3579cbaaca5334526 *tests/testthat/test-filter_by_top_enriched.R
654a43ec83e166c858f97ae7a4144175 *tests/testthat/test-load_input_regions.R
75d377f46e782dc94155748c907b1779 *tests/testthat/test-prepareInputRegions.R
9243a34c3d6e4bb1733444044d7305e0 *tests/testthat/testthat.Rout
87c8731885686222cd111660a294f917 *vignettes/peakCombiner-refs.bib
8a18b3e1de2a37ac03f0bbf2e750c895 *vignettes/peakCombiner.Rmd
