445683d5a5a60bae19592462f8e6d6ba *DESCRIPTION
fe1bf2f009ac045b9914b13c71418363 *NAMESPACE
731a3df5b94623e5043f2bcc55d7d716 *R/TODO/nucleoCluster-methods.R
58b4ecf18d719f52a17a145e07065dc0 *R/TODO/plotCoverOverlap.R
55505ac221b94af2680513d5d81b68f3 *R/controlCorrection.R
3526dbaa7fd2190a63ca623f50407714 *R/coverage.rpm.R
cdc573b6f23243459d444501c199449b *R/export.bed.R
e0794f6e770b3e74537c1888633b4850 *R/export.wig.R
fafda48e3b643484986872527ccd3d4b *R/filterFFT.R
e6b2378a6407ff0e12f01c09a7280bac *R/fragmentLenDetect.R
36129c871de8cc4fcfdb9b508c0ca007 *R/helpers.R
202a0b14f125d9366e484f9a9007bc00 *R/mergeCalls.R
56c41ae02c0cbe0b14fc4d2ea123f651 *R/nucleR-package.R
662784590683f5691e5148fe9130661d *R/pcKeepCompDetect.R
8bde09e6d7e33c787c05a4e0f0f6c031 *R/peakDetection.R
97f5e2763a85c167a71a9cbdec8c8c02 *R/peakScoring.R
c50bd75f5678424ef44cdaa04e047781 *R/plotPeaks.R
eb9d4de45bb1083f0ef8dbe7aa381f8f *R/processReads.R
bd34f5191f1561ab55fed108bc618259 *R/processTilingArray.R
f5df4ceeb6516728b0daaf9602749256 *R/readBAM.R
33dfc7fb329f03fcec6d65b3e2466b77 *R/readBowtie.R
19096924ef064b6d4934445282411e8a *R/sample_data.R
6ac6c15f9f47e2cb57d47efede18faed *R/syntheticNucMap.R
efa9f55b67097da3efa43dcf5c094ab2 *README.md
5d9092720e08e1c8f7e86ccf46535d73 *build/vignette.rds
771b923efebf1b8c083a8b8a22afb61b *data/nucleosome_htseq.rda
091b97cd9397798e9e192d1785199047 *data/nucleosome_tiling.rda
2bbf28e8e547c021692b28c9202045af *inst/CITATION
b39095e87555bc74760402719b51c9ca *inst/NEWS
06bd95f8da07ccf6aa73151b1709b3c5 *inst/doc/nucleR.R
72d69aa56dab5bbb78f5e16f8e76de8e *inst/doc/nucleR.Rmd
8e4188f4a8dcd48bb311836dcb55b071 *inst/doc/nucleR.html
866892392eb5bc88701786332d6423c9 *inst/extdata/cellCycleM_chrII_5000-25000.bam
e57584b4e5616430377bc4a9ce32a6b8 *man/controlCorrection.Rd
36871bee2b3c5c7842720839b14fe51f *man/coverage.rpm.Rd
024ce850ae04a787f49225fea52c8b9d *man/dot-fftRegion.Rd
6a3a4a62720d8ec932ae81896964f325 *man/dot-getThreshold.Rd
a9dd427c8b9ce3c1886dc462f9725fe4 *man/dot-loadFiles.Rd
96debf25c0c29fe807e9e484a20510e6 *man/dot-loadPairedBam.Rd
c842cb070a613b685484158e801c827e *man/dot-loadSingleBam.Rd
133a3f6d14362307cedba76b3cdf1555 *man/dot-mid.Rd
41886f27c62e320ac25c7dde81893fea *man/dot-processStrand.Rd
02cd74752e0debe0f0093657f5aa4963 *man/dot-unlist_as_integer.Rd
8ad515703c54f811591fb0816bd6dc79 *man/dot-vectorizedAll.Rd
04d9f46e048f0d55618461d7e9ce553f *man/dot-xlapply.Rd
d9cd1510d21807373a3685a1248b7bd4 *man/export.bed.Rd
67168fa20f618180b1cb10606e6d353f *man/export.wig.Rd
69be00c9782e527667c7db44ab779b6c *man/filterFFT.Rd
e1d33aac5b497a75a61d50607d22106f *man/fragmentLenDetect.Rd
5e553a9c295c492dd1bb2e1617684546 *man/mergeCalls.Rd
e944208cbf03e1fd766ab0680aacb74c *man/nucleR-package.Rd
a802ceaf08161034b75e2427d1ddd441 *man/nucleosome_htseq.Rd
4ef9409c9c363b587dd96fcc93d64879 *man/nucleosome_tiling.Rd
b386fc587707d8a9c3fdf184cae5c33a *man/pcKeepCompDetect.Rd
7a1c38185a68959869f14c6e7f712ed5 *man/peakDetection.Rd
ad279c910548500c8c81282684d1abee *man/peakScoring.Rd
0d4454ee4a0631a36856f84e0692f2c9 *man/plotPeaks.Rd
1217784737ab2e351530c76773352e8a *man/processReads.Rd
3db65d890e312e489f8aa9f7989dfc07 *man/processTilingArray.Rd
cc2bc96a06b23463a8298d51abd27dc3 *man/readBAM.Rd
995aff32df7795e73ca3602e7cdf2673 *man/readBowtie.Rd
60d4d0dd46da0a5caa46499fcbf01a1a *man/syntheticNucMap.Rd
23a2f394b9248c7ddd7b6d9d67ba4486 *tests/testthat.R
85fa6c6e88c2acfd7866743dbc3a78c8 *tests/testthat/test-coverage.rpm.R
72d69aa56dab5bbb78f5e16f8e76de8e *vignettes/nucleR.Rmd
19fba5f4a557a8072cddb4bc21293d98 *vignettes/references.bib
