dd83622f61c5735e5cb7793ea6f6a96b *DESCRIPTION
91e4cc0f042b4a14946d57beb4fe381d *NAMESPACE
5f7ca409d23cd4da8da838c4dbcd9022 *NEWS.md
6c9a1db890bc19cd859ceb8a5bef288d *R/AllGeneric.R
9ed18017b5c67b16f3a57e4e94161ced *R/callSignificance.R
fc84f1caa1820bb24f4779425d1d53e7 *R/get_functions.R
df6cc46bc7fae1a55b713f3d5065b35a *R/multistateQTL-package.R
f281e345e3ccc37ef484a9bde0850176 *R/plot_helper_functions.R
6bbef423c122c04b803a76452ba207a5 *R/plots.R
d4dee245a9f50f5dcf77a7e0a1405cd6 *R/replaceNAs.R
9e6f0d1b3f877480030bb850e18e089e *R/runPairwiseSharing.R
4d780dcc4517b308924502a928723890 *R/runSignificantFeatures.R
798ab919a21a3bccfacb7b3f6e1967ff *R/runTestMetrics.R
32dc04b2aec4145f563271dd29e1e74e *R/sim_estimate.R
71c43c61705f39caf6823b47d929efc0 *R/sim_performance.R
7e7bf30a22d8ce32cacd7a8b11b62eb2 *R/sim_simulate.R
d85fe35b00c74b5bdc61b55afaf05313 *R/utils.R
de435cf362f62fe4fb74bc79b3fc7d25 *README.md
a412176f85a7d799ec287a9ba51d9c52 *build/vignette.rds
87c689a47c3ce2550664fe7dac9bb817 *inst/WORDLIST
12a470a8b077b1e5281170f187632dc0 *inst/doc/multistateQTL.R
7ec85ad2e09dc80ff6e46af3ad916adc *inst/doc/multistateQTL.Rmd
b88b90b9f98f56d824b22c4742627344 *inst/doc/multistateQTL.html
a47b05f1d74fccba0b20cc392db70e8d *inst/extdata/EBI_dataset_metadata.tsv
0061c07258ebdf173fd65e7e2fe32a9b *inst/extdata/GTEx_tx_blood.tsv
382eadc61106d637a9973666c20ac0f5 *inst/extdata/GTEx_tx_lung.tsv
a839ecb5768597b7a549ca4344e23f20 *inst/extdata/GTEx_tx_spleen.tsv
65b1665847b8ef9dbae3c239ab162848 *inst/extdata/GTEx_tx_thyroid.tsv
7fd28384b53d61a75762c2f7e33c5c88 *inst/script/download_GTEx_data.R
fc47f41bc385f85ef148f05566d08124 *inst/script/subset_GTEx_data.R
59d8e43a9ce20b7ccd7840360c065a88 *man/callSignificance.Rd
1177f67d1acbaddca0ec68f809303783 *man/getComplete.Rd
688c066bc4f8ca80415c44c45d4f8a2f *man/getSignificant.Rd
c7d06c9e071f92afb190e93e3d52ee92 *man/getTopHits.Rd
0988a4cd4b88651441579d3429fee5cc *man/multistateQTL-package.Rd
363bfe7a48ee65053b8ecf4bda79f65c *man/plotCompareStates.Rd
b72e6c7af83b514dcdfa609c1fb21b2a *man/plotPairwiseSharing.Rd
4181180083f17ba3ed16a926c1379563 *man/plotQTLClusters.Rd
1932febbc93b841ac50555589b5b2f02 *man/plotSimulationParams.Rd
f7af78d166e4fc016902be398b0bc059 *man/plotUpSet.Rd
ed5ffd2da34bcac7edb89904ecdd5fc2 *man/qtleEstimate.Rd
cd97ba8c00c7349d1989285f69162fe9 *man/qtleParams.Rd
5efd8d7ec4ec4fa26fa181c01bef8c4f *man/qtleSimulate.Rd
37a849b20e9036adbf6b91661c6dca33 *man/replaceNAs.Rd
7266014d75670cfbc0194064be824794 *man/runPairwiseSharing.Rd
a767f6a8d3e73a5393fe6a20f5d6f56a *man/runSignificantFeatures.Rd
56770fb5beda75189537f4e890bf86cf *man/runTestMetrics.Rd
335cbe45070c22b67229e36766df5a7a *man/simPerformance.Rd
de16b2c7057034452c6923476003492d *tests/testthat.R
2c3063c032f9cb6c42294ce17c8dfc85 *tests/testthat/setup.R
81916a86cabf34e93bef084121274dcc *tests/testthat/test-estimate.R
f423eb459df8e894bae1253aa5485fb1 *tests/testthat/test-get-significant.R
ad2ac45783ea829bdcb67fb04dd5cae2 *tests/testthat/test-msqe-subset.R
973ee3e0146405e9dd52012f3cfb05df *tests/testthat/test-plotting.R
3de781544904fe5b9fcdf2350bfb5b16 *tests/testthat/test-replaceNAs.R
19ba56f24622bd33883b70cbc9431391 *tests/testthat/test-runTestMetrics.R
88bbedbd381e3e07096ba1f661a79340 *tests/testthat/test-simulations.R
7ec85ad2e09dc80ff6e46af3ad916adc *vignettes/multistateQTL.Rmd
