b694feccc26446c86fdee672178b839b *DESCRIPTION
a885a46e3b1122b962e26d75e1dcdcf4 *NAMESPACE
ea4723ccb36a54ff9a01a43786713f14 *R/completeMomentsON.R
35a72c74d07f0a34066b3cc21d3ec8b3 *R/dpc.R
7143668f54f5e0de0843ab378ddb774b *R/dpcCN.R
392b3f41202d4d2cd615904f723445c5 *R/dpcDE.R
703868625fb353d876dfabf5f66cab45 *R/dpcImpute.R
49d8fc4319dd517307adbd878e96bdb6 *R/dpcImputeHyperparam.R
626550471d13dfd45cf69b91157df237 *R/dpcON.R
6af2ad72ded6be6850c7c10bb553a0d7 *R/dpcQuant.R
d54ce9cea0e1d2e3500889015ffbaff3 *R/dpcquantHyperparam.R
ae4475b9c8b38b16785770907755f3dc *R/dztbinom.R
18c6e6df856bc2fee69b266a0cca255d *R/estimateDPCIntercept.R
af750edd3eb6bdc780ca877f84cd14e3 *R/filterCompoundProteins.R
e72c12e3c80db80acf14ed6ad6f67b76 *R/filterNonProteotypicPeptides.R
92e7b6d8bae99dcf7f879f9eaa19602e *R/filterSingletonPeptides.R
23c9f134acdedb74a0c6f588ec5a562b *R/fitZTLogit.R
33e20fda32a5f543032854b18528cf54 *R/imputeByExpTilt.R
f17abcc025d1e723f429ff25837ecb17 *R/peptides2ProteinBFGS.R
59a93c25ec9f276ed6feb5567070a7cf *R/peptides2ProteinNewton.R
322bb7566b400f08414bd3bb131d5c51 *R/peptides2ProteinWithoutNAs.R
9aa5f06f8f1496bce75f6b94e891bd12 *R/peptides2Proteins.R
c4b9965d231230fb907143aab70b4809 *R/plotDPC.R
4e93c5dd4ccaa3eb94db679d70d9c2b1 *R/plotMDSUsingSEs.R
66ef5fba629e358f6699e6372fecbbad *R/plotPeptides.R
8ac4bbfc268a50f172eb53f3daf938f2 *R/plotProtein.R
62f9f83a6b2dc48fed6539a5f14bf194 *R/proteinResVarFromCompletePeptideData.R
d45f328eb1b2d4ed07212ad56a3c807e *R/pztbinomSameSizeLogitPBothTails.R
f634fbd933e32c79497ce2e93db80545 *R/readDIANN.R
52138c117e61fefcc59f8f2cc86f4c62 *R/readFragPipe.R
8fa61f10ef26a92e87a4b606bafd9c81 *R/readMaxQuant.R
fb0b4566c2ee45dfe1ff744aeb9e58b6 *R/readSpectronaut.R
15bcb8918d3c9d9c2e9ce0344762f13b *R/removeNARows.R
c98a5ba0d743685d864c3e3de20c43c0 *R/simCompleteDataON.R
a19224d1f1109b072405e6b9721ef58e *R/simProteinDataSet.R
efa1aa3d269927473172e9086c8a6ccb *R/voomaLmFitWithImputation.R
1bf18d9c216b8d95033f0bd2fe2906b2 *build/partial.rdb
5223753682ba0e185ef3e71342f8b45a *build/vignette.rds
568c6fcd9a72f734a2c6988ae9d758f1 *inst/CITATION
8745ea92224fc6db70bc0b3f13df5ba9 *inst/NEWS.Rd
1731951be5a8c0d1715cb5c56bfe0b2e *inst/doc/limpa.R
efb7bea57004088975f6dfd7ed4101f0 *inst/doc/limpa.Rmd
6eff345369cc5def1cd7fc4fabcb5237 *inst/doc/limpa.html
d7175cf02c896fc23f53d06f2815bff5 *man/completeMomentsON.Rd
45589cdfcc6d8fe06cb58830db37e0ff *man/dpc.Rd
a822d6a8c58b8088c72908dc67ff3803 *man/dpcCN.Rd
8bc98876c93173a809f689d15647fd99 *man/dpcDE.Rd
ce4bee51ea0d07c2e93b93e95dca96fc *man/dpcQuant.Rd
08c943d2a640627d5d96a305d1299073 *man/dpcquantHyperparam.Rd
20b368caf065b3a32d47840803ed5133 *man/dtbinom.Rd
a4b032e9527fcca087dc0ee3b32ce303 *man/estimateDPCIntercept.Rd
cdce252feeb6d579a1905009130133d5 *man/filterCompoundProteins.Rd
e58ee4ee9069c804c562ce99fe17f1cf *man/fitZTLogit.Rd
301e4a72516f5720b6389856fe8780d6 *man/imputeByExpTilt.Rd
249c29662974b31b3e8b95e703883506 *man/limpa-package.Rd
1c4b7b1ca11eac2f8728198a0869f0cc *man/observedMomentsCN.Rd
0a3050ed8059e890c8d7d63ef50073a3 *man/peptide2Protein.Rd
79c9183d9b98c7e52d7c620ae1941b9e *man/peptide2Proteins.Rd
eee4849bff4a6e8844858a25c3b54e5c *man/plotDPC.Rd
fd9ff71a7b3b80019ebb98d457667f4a *man/plotMDSUsingSEs.Rd
3931744024af53b4994d6383aa99c79a *man/plotPeptides.Rd
97f76f8e5b25551b630975efa0f3a0e7 *man/plotProtein.Rd
791a4e7f765f0eb0965b9514daa14bc6 *man/proteinResVarFromCompletePeptideData.Rd
2f0a2b51027119a78f5f3e41f832c7f1 *man/pztbinomSameSizeLogitPBothTails.Rd
84fdde07543622a9a9df5d927c988140 *man/readDIANN.Rd
e4f1230ce332e539503d2a3f88610927 *man/readFragPipe.Rd
01e7ba7b79a7ba7934392e1873f0129d *man/readMaxQuant.Rd
4a6727586629320ef0e88ada6960269e *man/readSpectronaut.Rd
169b17944d43a0f653db0ada4855a246 *man/removeNARows.Rd
e80ee510b4321bbb3d496d201a0e57d9 *man/simCompleteDataON.Rd
e3ea40b6f7ac55d3135a85c30b1e399e *man/simProteinDataSet.Rd
850e5651045883ad337ef671d562d0b2 *man/voomaLmFitWithImputation.Rd
8d64463a4a693bfa2f4fdf5d590f3a74 *tests/limpa-Tests.R
58e32e204e4492bbd48dcbdf57fd9399 *tests/limpa-Tests.Rout.save
efb7bea57004088975f6dfd7ed4101f0 *vignettes/limpa.Rmd
