e0c4e8362abfd2db01c3438c7e85b126 *DESCRIPTION
0162f2f78f0a2dac2a45ddefad3a386f *NAMESPACE
8d51f2755714355ef7ac03516f245a5d *NEWS
c76225225c598c055da3c34cd9b14904 *R/addSeqlengths.R
a154bc219f59b78bcd47a42bc415c50c *R/bindcadd_snv.R
9004dfd272f5ef7dd0b0e93f85e05bb0 *R/cache_current_gwascat.R
82407830bd3f17812aaca0c51cd67ef3 *R/classes.R
fe06e2963070cc52ac4cad498e595f15 *R/data.R
f150684adae0d7147d37eae7922ae2c2 *R/descendants.R
7ce01bf7dc3ed405d88a5c9e274bf6c8 *R/ebiquery.R
712c7e3186cb1157a9b6fea94d600d5b *R/fixnonasc.R
3a7522507f183e529454d0b6a7d66a2d *R/fixsnps.R
18ff32fec8caa111b189ab2025f89248 *R/funcs.R
586b3fc463d5f96cd6abab156415ae61 *R/gwcat_snapshot.R
4a12b3f6d94a9a6613a4270c27944cec *R/gwcex2gviz.R
e29e198f7034f3db7736acea762e8b4e *R/ldtagr.R
584a006f41c534f88b54886b74590a7f *R/makeConsecChrs.R
7143ed0b9b89e4e56325aca1a706ab04 *R/obotools.R
3893428dbecf5424a6a249e50ff21d7b *R/process_gwas_dataframe.R
9b285f66de50cf8c1dcac9652a4a0c20 *R/traitsManh.R
a38a80769859681de9459df35fbbc0c9 *R/updater.R
22e375aff2489416eced9f967e1d91d7 *R/zzz.R
c169122e200db3b8ca9593c4779c2620 *build/vignette.rds
817f6d4e19caba9f42f795293bba2d85 *data/datalist
a145a25bc5e61d07e59ae2e777d1df7d *data/ebicat_2020_04_30.rda
47fcaebf604deb503017a3784143a181 *data/efo.obo.g.rda
bc1602d23ad1ce6a28a83832a2742058 *data/g17SM.rda
857aa19c0c96ce95a796eeb843aeff47 *data/gg17N.rda
4e16f1070461608671770178f8933cef *data/gr6.0_hg38.rda
61ebec1726bff5a3ec7139ced6903aef *data/gw6.rs_17.rda
78760416a72ad7162196b306736ac3b7 *data/gwastagger.rda
992f6feada1837fe5d2c027e94169ffb *data/locon6.rda
4a65f6483905899ddbd698e71f97c5bd *data/low17.rda
151d2ec9a3b26ffd288b6519d573e0ec *data/si.hs.37.rda
f3de25e83d0476c396b9bcf2d46bfb8a *data/si.hs.38.rda
2c8f4aceb211718442736f1f3d998069 *inst/csv/nomatch.csv
84f706fc6471d79b5d08060982696d6c *inst/doc/gwascat.R
087077930171cd49dd06e72764c53807 *inst/doc/gwascat.Rmd
a30248c8caa8b140645d61f5dbcac743 *inst/doc/gwascat.html
6d05b3cc156cbcfccbcb57921b82cad7 *inst/doc/gwascatOnt.R
fd3e52b89f957582bcbe097582f1fda6 *inst/doc/gwascatOnt.Rmd
354b31f0b27bb5ce4686f4c57638a5b5 *inst/doc/gwascatOnt.html
bdeddc9e2202701c2b99517592ef6910 *inst/gff3/chr17_34834101_35834100.gff3
bfb9003de90627df87c88a0fde5c48e2 *inst/gff3/chr17_43000000_45000000.gff3
69166e9203a671f62a89fcfc40fa0d7c *inst/legacy/ebicat37.rda
b1ccae368cd7c7a03c1068bf32d74a95 *inst/legacy/ebicat37UCSC.rda
f86c5ece45d8046b3baffbd207429453 *inst/legacy/ebicat38.rda
373ce47a35a14ba5d3ddcc951e844304 *inst/legacy/ebicat_b37.rda
90be6aaa3323a851e85ab092924bd5b4 *inst/legacy/ebicat_b38.rda
976eaff9f30bacb4ada060879ddfbd6a *inst/legacy/gwdf_2014_09_08.rda
988b68739ad7b57eebd82366440efdb5 *inst/legacy/gwrngs19.rda
6011f7a42c58d8fc7741adeae073936d *inst/legacy/gwrngs38.rda
d2dd66f0bb548d8a92e3fc834697a917 *inst/legacy/rules_6.0_1kg_17.rda
843d35a1a1f266bb8bdd8dec64efd6ba *inst/legacy_doc/gwascat-package.R
8b5e407bc67d73a7301e023733a7847b *inst/legacy_doc/vardat.R
487189a056e2b1afabde769ba7b57a62 *inst/legacy_vig/gwascat.pdf
8f4538a33c6ae7541052d34a35c871f6 *inst/legacy_vig/integ.pdf
c2cbf1a087c6a37bbe4b0ffe75cc2f11 *inst/legacy_vig/litman.pdf
746400f11b7cee9d41d2cebca41bfb1f *inst/legacy_vig/rules.Rnw
d4732e3abced07c304bb1970db7a12a6 *inst/legacy_vig/tail
fc0e6976bdd5aac89d6d0fea12116099 *inst/obo/HumanDO.obo.gz
d55b5bdc5fdb33000767851a5de070a8 *inst/obo/efo.020815.obo.gz
e19896114d2d0ac942b212eabedd9839 *inst/obo/hpo.obo.gz
720674bee5b0b9e6634e016e039a3e9d *inst/olddata/gwdf_2012_03_20.rda
ae9c6ce038625279d0b56ef7feee0560 *inst/olddata/gwdf_2012_09_22.rda
05832edcb6fd23411c6644a2057a8f5c *inst/olddata/gwrngs.rda
69cd08f690679092ca8c5ea839969f3f *inst/scripts/builders.hist.txt
9b0e991ac438df0fc2c87ed6b42f0756 *inst/scripts/do_37_2020.hist.txt
cd4b26ada31fd8356dacc6658af8f769 *inst/scripts/doebicat38.hist.txt
7f87bd634fe4b6f50d4d1929b7ab9912 *inst/tab/build0307df.hist.txt
ed352347ae42ffe2e347b6256e296997 *inst/tab/build0307df.hist.txt.gz
e9c66ae3fd9b7f5cfb5a2282cfa65405 *inst/tab/gwascatalog20120307.txt.gz
95c5a077c4f29ef308a56d3e8b5cfa5b *inst/tab/gwascatalog20120320.txt.gz
8424abc7a5e549b143a698b58f7cd403 *inst/tab/import_gwtab.R
4c8d89f916b7947b389a5fd64f511474 *inst/vcf/CEU.exon.2010_09.genotypes.vcf.gz
5b47cfadb916fcf9aa05ca18cb32e3cd *inst/vcf/CEU.exon.2010_09.genotypes.vcf.gz.tbi
4cf5b3d6173a1486279c87647504090a *man/as_GRanges.Rd
4d7c4e631dd04a711e2f4dad29fe899f *man/bindcadd_snv.Rd
0cf17c13b68c0b2cf641dfa01a029ac0 *man/chklocs.Rd
7618bfe08dfbe1f4181ede74132472c5 *man/ebicat_2020_04_30.Rd
2c3cea7ed88854eeabf1f65fb0bf15fd *man/fixsnps.Rd
226a5027915ebb70b9add48c0e39ba04 *man/g17SM.Rd
11897d402eb9d87c9d4fca8591a009f4 *man/getRsids-gwaswloc-method.Rd
47d006fc9c485632679656bd1a636ab8 *man/getRsids.Rd
e175757c940219535cbd7732e3075d26 *man/getTraits-gwaswloc-method.Rd
82277ee071689df861390804c2e7bd65 *man/getTraits.Rd
150859457d36fbfe5b0a412662a7f815 *man/get_cached_gwascat.Rd
743cb1c51a3d6777379aab5f11b6abb3 *man/gg17N.Rd
6083dd67172363dbfd74625193a54e53 *man/gr6.0_hg38.Rd
f86fde40990627400ef2ea49d6d3b49b *man/gw6.rs_17.Rd
c1684eded8c678593536faf9a1dd4ac5 *man/gwascat_from_AHub.Rd
45e2fa07f4f4ea9c241b3a7560acbcc4 *man/gwastagger.Rd
98872ce3363de5775ff45b821123225f *man/gwaswloc-class.Rd
6520814a8760fca4fd069d45e1cc0a25 *man/gwcat_snapshot.Rd
7f33083b1d764deb6c4de578bfe134e6 *man/gwcex2gviz.Rd
4fc6f13e37df973f31ddecd7e3c43721 *man/ldtagr.Rd
b1b88d1cec0d3eab84e4153b92bd9a6e *man/locon6.Rd
f159ec1e05381aa4ddd5e836f4c032e8 *man/locs4trait.Rd
e11c81a6301633f99b4641b3ea359b8d *man/low17.Rd
02695b3eed81d6b3008b2b33409be627 *man/makeCurrentGwascat.Rd
71a6589f89f1f8e1727b3cbdccc9d21d *man/obo2graphNEL.Rd
553efae2edea765717b2d444402bd241 *man/process_gwas_dataframe.Rd
eaa3eb7809962f9ad66ddaf27bbbd2c3 *man/riskyAlleleCount.Rd
9ae04ce0509eaca3d6c4682d81889765 *man/si.hs.37.Rd
639afe9b44b871db0f855384223c91e8 *man/si.hs.38.Rd
d7201cd915662b1ddf2b66fb880e1765 *man/sub-gwaswloc-ANY-ANY-ANY-method.Rd
7f3f09babbc7b109eb05f5f7212623ee *man/subsetByChromosome-gwaswloc-method.Rd
9010b96cf01534d0e03b562c72398522 *man/subsetByChromosome.Rd
dc9231476275be8d3ad4b061155290bd *man/subsetByTraits-gwaswloc-method.Rd
ac747b6b4daf42e23e707b959a4cbb74 *man/subsetByTraits.Rd
2f4c7ed3f270f2dde392b38dd50c39bb *man/topTraits.Rd
9a2b0b38824e7c36918f5364641c634e *man/traitsManh.Rd
5fdecef5984c7c41de88e481fec24287 *tests/testthat.R
2749946f7b4f7f62080ff1cefe7d7768 *tests/testthat/test_gwascat.R
087077930171cd49dd06e72764c53807 *vignettes/gwascat.Rmd
a6cdab4a5b205dd0c2857e6e65413a3c *vignettes/gwascat.bib
fd3e52b89f957582bcbe097582f1fda6 *vignettes/gwascatOnt.Rmd
c2cbf1a087c6a37bbe4b0ffe75cc2f11 *vignettes/litman.pdf
